RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 EEF1A1P68104 462 aaKnown RBP14.57□□□□□ -0.08
COL17A1-202ENST00000369733 OR5M1Q8NGP8 315 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 OR14A16Q8NHC5 309 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 BANF2Q9H503 90 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 C8orf33Q9H7E9 229 aaPredicted RBP14.57□□□□□ -0.08
COL17A1-202ENST00000369733 DLL4Q9NR61 685 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 TP53TG5Q9Y2B4 290 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 B3GALT5Q9Y2C3 310 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 RAE1P78406 368 aaKnown RBP14.57□□□□□ -0.08
COL17A1-202ENST00000369733 CDK5Q00535 292 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 B4GALNT1Q00973 533 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 MLC1Q15049 377 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 CST9LP1Q5W188 147 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 IFT22Q9H7X7 185 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 EVPLQ92817 2033 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 JTBO76095 146 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 TPPPO94811 219 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 WNT1P04628 370 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 IL5P05113 134 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 RPL27P61353 136 aaKnown RBP14.56□□□□□ -0.08
COL17A1-202ENST00000369733 PHLDA2Q53GA4 152 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 Q6ZRG5 221 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 FN3KRPQ9HA64 309 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 CEBPZOSA8MTT3 80 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 TRAPPC2LH3BP13 241 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 LAP3P28838 519 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 SDHAP31040 664 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 MAP2K6P52564 334 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 SELENOVP59797 346 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 PDZD11Q5EBL8 140 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 OR2G3Q8NGZ4 309 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 FER1L6Q2WGJ9 1857 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 ALOX5APP20292 161 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 EPHA4P54764 986 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 OR2B8PP59922 312 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 NECAP2Q9NVZ3 263 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 SAGE1Q9NXZ1 904 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 PLEKHB1Q9UF11 243 aaPredicted RBP14.56□□□□□ -0.08
COL17A1-202ENST00000369733 V9GYH0 126 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 GJA4P35212 333 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 GABREP78334 506 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 CAMK2BQ13554 666 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF628Q5EBL2 1059 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 TMEM182Q6ZP80 229 aaPredicted RBP14.56□□□□□ -0.08
COL17A1-202ENST00000369733 RNF165Q6ZSG1 346 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 RTL10Q7L3V2 364 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 LGI3Q8N145 548 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 SUMF1Q8NBK3 374 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 OR9K2Q8NGE7 335 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 PPP1R1CQ8WVI7 109 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 SLC6A18Q96N87 628 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 KIR3DX1Q9H7L2 352 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 SLC39A9Q9NUM3 307 aa14.56□□□□□ -0.08
COL17A1-202ENST00000369733 IGHA2P01877 340 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 CLDN17P56750 224 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 SHEQ5VZ18 495 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 CPEB2Q7Z5Q1 589 aaKnown RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 SLC46A1Q96NT5 459 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 A8MVM7 634 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 LEUTXA8MZ59 168 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 TIMP1P01033 207 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 AADACL3Q5VUY0 350 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 MARCH3Q86UD3 253 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 WDR5BQ86VZ2 330 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 LSMEM1Q8N8F7 131 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 UFSP2Q9NUQ7 469 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 MT-ATP6P00846 226 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 UBE2NP61088 152 aaKnown RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 GPNMBQ14956 572 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF705AQ6ZN79 300 aaPredicted RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 FAM71CQ8NEG0 241 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 DUSP18Q8NEJ0 188 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 SFT2D1Q8WV19 159 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 NANOS1Q8WY41 292 aaKnown RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 C19orf43Q9BQ61 176 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 PAPOLGQ9BWT3 736 aaKnown RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 NXT1Q9UKK6 140 aaKnown RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 APLNRP35414 380 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 MSMO1Q15800 293 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 TMEM176BQ3YBM2 270 aaPredicted RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 FAM78AQ5JUQ0 283 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 C1orf140Q5VVS0 124 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 TMEM71Q6P5X7 295 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 C1orf87Q8N0U7 546 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 OR13C8Q8NGS7 320 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 PSMF1Q92530 271 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 ANKRD9Q96BM1 317 aaPredicted RBP14.55□□□□□ -0.08
COL17A1-202ENST00000369733 COL18A1P39060 1754 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 KCNE1BA0A087WTH5 132 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 H7C1Q1 480 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 ATF1P18846 271 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 HBG1P69891 147 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 HBG2P69892 147 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 ADIRFQ15847 76 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 GSG1Q2KHT4 349 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 LYG2Q86SG7 212 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 OR51A4Q8NGJ6 313 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 WWTR1Q9GZV5 400 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 GAB2Q9UQC2 676 aa14.55□□□□□ -0.08
COL17A1-202ENST00000369733 DLEC1Q9Y238 1755 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms