RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 LRRC28Q86X40 367 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 CCDC36Q8IYA8 594 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 IZUMO1Q8IYV9 350 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 RFLNBQ8N5W9 214 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 ZNF433Q8N7K0 673 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 GPR119Q8TDV5 335 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 SCMH1Q96GD3 660 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 TGIF2Q9GZN2 237 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 AKAP7Q9P0M2 348 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 HS3ST3B1Q9Y662 390 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 VSTM2BA6NLU5 285 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 H3BML4 177 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 RAB3BP20337 219 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 PSMD4P55036 377 aaKnown RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 OC90Q02509 493 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 ACSM1Q08AH1 577 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 TGIF1Q15583 401 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 PDSS1Q5T2R2 415 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 SUMF1Q8NBK3 374 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 RELL2Q8NC24 303 aaPredicted RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 RASD2Q96D21 266 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 ORAI1Q96D31 301 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 SOSTQ9BQB4 213 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 EVA1AQ9H8M9 152 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 POLE3Q9NRF9 147 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 C14orf105Q9NVL8 296 aa9.61□□□□□ -0.87
TPM3-212ENST00000368533 AK6Q9Y3D8 172 aaKnown RBP9.61□□□□□ -0.87
TPM3-212ENST00000368533 C9orf172C9J069 976 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 SSX5O60225 188 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 FZD7O75084 574 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 TCRBP04435 133 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 AHCYP23526 432 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 EDNRAP25101 427 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 AQP2P41181 271 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 KCNJ3P48549 501 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 HOXA1P49639 335 aaPredicted RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 BLVRAP53004 296 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZNF613Q6PF04 617 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZNF704Q6ZNC4 412 aaPredicted RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 TMPRSS11FQ6ZWK6 438 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZPLD1Q8TCW7 415 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 THAP4Q8WY91 577 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 KISS1RQ969F8 398 aaPredicted RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 ADGRL4Q9HBW9 690 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 RPH3AQ9Y2J0 694 aaPredicted RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 RTTNQ86VV8 2226 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 IGKV1D-42A0A075B6H8 117 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 H3BSH0 61 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ITGA10O75578 1167 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 MT-ND4P03905 459 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZNF806P0C7X5 589 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 HIST1H1CP16403 213 aaKnown RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 CENPAP49450 140 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZNF85Q03923 595 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 PON3Q15166 354 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 TSSK2Q96PF2 358 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ABHD1Q96SE0 405 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 PDCD1LG2Q9BQ51 273 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 CMSS1Q9BQ75 279 aaKnown RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZNF436Q9C0F3 470 aaPredicted RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 METTL7AQ9H8H3 244 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 CYSLTR2Q9NS75 346 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 MYOTQ9UBF9 498 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 PFDN2Q9UHV9 154 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 MRTO4Q9UKD2 239 aaKnown RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 PADI1Q9ULC6 663 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 PCDHGA5Q9Y5G8 931 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 TRBV2A0A0J9YWF9 115 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 A8MXK9 166 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 KRBOX1C9JBD0 128 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 H7C2Y5 167 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 SGCEO43556 437 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 IL11P20809 199 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 TAS2R43P59537 309 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 BDH1Q02338 343 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 EGR4Q05215 589 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 PCOLCEQ15113 449 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ATP1A1-AS1Q5TC04 95 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 FNDC7Q5VTL7 733 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ARHGAP11AQ6P4F7 1023 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 FIP1L1Q6UN15 594 aaKnown RBP9.6□□□□□ -0.87
TPM3-212ENST00000368533 OVCH2Q7RTZ1 564 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 TOMM5Q8N4H5 51 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 BVESQ8NE79 360 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 CT55Q8WUE5 264 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 NMNAT3Q96T66 252 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 TIMP4Q99727 224 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 ZMIZ1Q9ULJ6 1067 aa9.6□□□□□ -0.87
TPM3-212ENST00000368533 DOCK10Q96BY6 2186 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 RPP14O95059 124 aaKnown RBP9.59□□□□□ -0.87
TPM3-212ENST00000368533 MT-CO3P00414 261 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 GALNSP34059 522 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 FOLR3P41439 243 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 AKR1C2P52895 323 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 AKR1C1Q04828 323 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 TRIP6Q15654 476 aaKnown RBP9.59□□□□□ -0.87
TPM3-212ENST00000368533 HFEQ30201 348 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms