RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ZNF823P16415 610 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 NPR2P20594 1047 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 MSR1P21757 451 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 LAP3P28838 519 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 DBPQ10586 325 aaPredicted RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 IL18R1Q13478 541 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 SNTB1Q13884 538 aaKnown RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 DAZAP2Q15038 168 aaPredicted RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 TBRG1Q3YBR2 411 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 SLC16A14Q7RTX9 510 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 C17orf78Q8N4C9 275 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 SLC22A24Q8N4F4 322 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 BBS1Q8NFJ9 593 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 NMD3Q96D46 503 aaKnown RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 ZC3HAV1LQ96H79 300 aaKnown RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 CDADC1Q9BWV3 514 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 NELFAQ9H3P2 528 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 Q9H521 79 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 RNF121Q9H920 327 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 CCNB1IP1Q9NPC3 277 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 CLN6Q9NWW5 311 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 DNAJC27Q9NZQ0 273 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 LRBAP50851 2863 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 FREM1Q5H8C1 2179 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 IGLV1-36A0A0B4J1U3 117 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 A0A1W2PR80 420 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 SNTNA6NMZ2 147 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 DCTN6O00399 190 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 PRODHO43272 600 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 GOSR1O95249 250 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 GPANK1O95872 356 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 WNT11O96014 354 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 PPP3CBP16298 524 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 FMO3P31513 532 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 ZNF133P52736 654 aaPredicted RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 BLVRAP53004 296 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 CDH11P55287 796 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 ADAM8P78325 824 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 MRPS34P82930 218 aaKnown RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 TLE4Q04727 773 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 GABRA6Q16445 453 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 SLC36A2Q495M3 483 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 ZNF362Q5T0B9 420 aaPredicted RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 ZNF691Q5VV52 312 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 ZBTB46Q86UZ6 589 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 TRUB1Q8WWH5 349 aaKnown RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 RFKQ969G6 155 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 Q96MT0 163 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 ZNF184Q99676 751 aaPredicted RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 SH3GL3Q99963 347 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 USB1Q9BQ65 265 aaKnown RBP11.09□□□□□ -0.63
EFNA1-201ENST00000368406 HCAR1Q9BXC0 346 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 OR10A4Q9H209 315 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 EMC7Q9NPA0 242 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 POLE4Q9NR33 117 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 MOKQ9UQ07 419 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 AMDHD2Q9Y303 409 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 UGT2A1Q9Y4X1 527 aa11.09□□□□□ -0.63
EFNA1-201ENST00000368406 TEX15Q9BXT5 2789 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 FAM221AA4D161 298 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 SH3D21A4FU49 640 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 TVP23AA6NH52 213 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 OR5H1A6NKK0 313 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 SLC22A31A6NKX4 558 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 C12orf71A8MTZ7 269 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 GLCEO94923 617 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 RAB36O95755 333 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 GSTT1P30711 240 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 CCKARP32238 428 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 ATP6V1E1P36543 226 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 TUBA1BP68363 451 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 TUBA4AP68366 448 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 ADARB1P78563 741 aaKnown RBP11.08□□□□□ -0.64
EFNA1-201ENST00000368406 TEKQ02763 1124 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 PPA1Q15181 289 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 MEP1BQ16820 701 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 SLC35D3Q5M8T2 416 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 NXNL2Q5VZ03 156 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 TMEM53Q6P2H8 277 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 TUBA1AQ71U36 451 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 BCDIN3DQ7Z5W3 292 aaKnown RBP11.08□□□□□ -0.64
EFNA1-201ENST00000368406 WFDC8Q8IUA0 241 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 ERI1Q8IV48 349 aaKnown RBP11.08□□□□□ -0.64
EFNA1-201ENST00000368406 ENTHD1Q8IYW4 607 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 OR2AJ1Q8NGZ0 328 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 BCL2L2Q92843 193 aaPredicted RBP11.08□□□□□ -0.64
EFNA1-201ENST00000368406 ZMYND19Q96E35 227 aaPredicted RBP11.08□□□□□ -0.64
EFNA1-201ENST00000368406 MUS81Q96NY9 551 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 NMNAT2Q9BZQ4 307 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 SLC17A5Q9NRA2 495 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF226Q9NYT6 803 aa11.08□□□□□ -0.64
EFNA1-201ENST00000368406 A6NNC1 897 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 CTAG2O75638 210 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 UBL3O95164 117 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 MPZL1O95297 269 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 MRPL3P09001 348 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms