RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NHLRC1Q6VVB1 395 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 TMEM99Q8N816 258 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 RELTQ969Z4 430 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 YIPF6Q96EC8 236 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 WBP1Q96G27 269 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 OR5M11Q96RB7 305 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 MGLLQ99685 303 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 ZNF649Q9BS31 505 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 NARFLQ9H6Q4 476 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 ERVK13-1Q9NX77 482 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 PCDHGB7Q9Y5F8 929 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 NPIPA5E9PKD4 350 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 ATP6V1G2-DDX39BF2Z307 99 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 VAMP5O95183 116 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 SCG5P05408 212 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 HLA-DOBP13765 273 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 CENPAP49450 140 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 MEOX1P50221 254 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 WNT4P56705 351 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 POU3F1Q03052 451 aaPredicted RBP10.77□□□□□ -0.68
USF1-203ENST00000368021 WIPI1Q5MNZ9 446 aaPredicted RBP10.77□□□□□ -0.68
USF1-203ENST00000368021 LINC01590Q5TEZ4 76 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 EEF1A1P5Q5VTE0 462 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 CORO6Q6QEF8 472 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 B3GLCTQ6Y288 498 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 ESPNLQ6ZVH7 1005 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 SLC35D2Q76EJ3 337 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 SHFQ7M4L6 423 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 ZBTB46Q86UZ6 589 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 KDM8Q8N371 416 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 OR52N1Q8NH53 320 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 ASB10Q8WXI3 467 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 OXGR1Q96P68 337 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 CNN2Q99439 309 aaKnown RBP10.77□□□□□ -0.68
USF1-203ENST00000368021 SMAD5Q99717 465 aaKnown RBP10.77□□□□□ -0.68
USF1-203ENST00000368021 ALG12Q9BV10 488 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 NAA50Q9GZZ1 169 aaKnown RBP10.77□□□□□ -0.68
USF1-203ENST00000368021 SYT4Q9H2B2 425 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 ISYNA1Q9NPH2 558 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 ING3Q9NXR8 418 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 NPIPA1Q9UND3 350 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 RASD1Q9Y272 281 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 KLF2Q9Y5W3 355 aaPredicted RBP10.77□□□□□ -0.68
USF1-203ENST00000368021 FKBP7Q9Y680 259 aa10.77□□□□□ -0.68
USF1-203ENST00000368021 COL6A6A6NMZ7 2263 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 A0A0J9YW62 118 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 SFTPCP11686 197 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 IFNGR1P15260 489 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 TGFBR2P37173 567 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 LIPAP38571 399 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 AGFG1P52594 562 aaKnown RBP10.77□□□□□ -0.69
USF1-203ENST00000368021 RAC3P60763 192 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 MLLT11Q13015 90 aaPredicted RBP10.77□□□□□ -0.69
USF1-203ENST00000368021 POU4F3Q15319 338 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 ZNF404Q494X3 552 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 ARMCX4Q5H9R4 360 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 TMEM225Q6GV28 225 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 SLC16A12Q6ZSM3 486 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 GGNQ86UU5 652 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 P2RY8Q86VZ1 359 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 UEVLDQ8IX04 471 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 OR6V1Q8N148 313 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 TMEM251Q8N6I4 163 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 ZNF485Q8NCK3 441 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 OR5T2Q8NGG2 359 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 MCFD2Q8NI22 146 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 ZMYND19Q96E35 227 aaPredicted RBP10.77□□□□□ -0.69
USF1-203ENST00000368021 NAA11Q9BSU3 229 aaPredicted RBP10.77□□□□□ -0.69
USF1-203ENST00000368021 PAQR5Q9NXK6 330 aaPredicted RBP10.77□□□□□ -0.69
USF1-203ENST00000368021 TUBD1Q9UJT1 453 aa10.77□□□□□ -0.69
USF1-203ENST00000368021 COL12A1Q99715 3063 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 SLC22A23A1A5C7 686 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 ZNF780AO75290 641 aaPredicted RBP10.76□□□□□ -0.69
USF1-203ENST00000368021 C1QL1O75973 258 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 OR2T7P0C7T2 308 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 CD36P16671 472 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 POU3F2P20265 443 aaPredicted RBP10.76□□□□□ -0.69
USF1-203ENST00000368021 MAGEA5P43359 124 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 RGS6P49758 472 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 PLGLB1Q02325 96 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 GALEQ14376 348 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 TBRG1Q3YBR2 411 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 LHFPL3Q86UP9 236 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 GHDCQ8N2G8 530 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 KLHL36Q8N4N3 616 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 OR51L1Q8NGJ5 315 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 OR6K6Q8NGW6 343 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 OR2T27Q8NH04 317 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 ZNRF4Q8WWF5 429 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 SMPDL3BQ92485 455 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 HTRA1Q92743 480 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 ZHX1-C8orf76Q96EF9 292 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 ADGRG7Q96K78 797 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 TSSK2Q96PF2 358 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 CITED4Q96RK1 184 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 ACKR4Q9NPB9 350 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 LUZP4Q9P127 313 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 PCDHGA9Q9Y5G4 932 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms