RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 ANKDD1AQ495B1 522 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 SLC35F1Q5T1Q4 408 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 AGAP6Q5VW22 663 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 FAM205BPQ63HN1 556 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 TMEM53Q6P2H8 277 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 TMEM179BQ7Z7N9 219 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 HS3ST5Q8IZT8 346 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 SDR9C7Q8NEX9 313 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 OR8D4Q8NGM9 314 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 OR4K13Q8NH42 304 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 GNPDA2Q8TDQ7 276 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 TRMT61AQ96FX7 289 aaKnown RBP12.67□□□□□ -0.38
SF3B5-201ENST00000367569 RBP7Q96R05 134 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 CHID1Q9BWS9 393 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 CCNB1IP1Q9NPC3 277 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 NRIP3Q9NQ35 241 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 CBLN4Q9NTU7 201 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 TBC1D23Q9NUY8 699 aa12.67□□□□□ -0.38
SF3B5-201ENST00000367569 PRSS37A4D1T9 235 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 CENPBD1B2RD01 187 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 MGRN1O60291 552 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 SLC16A7O60669 478 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 MPZL1O95297 269 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 CST1P01037 141 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 GASTP01350 101 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 MMP7P09237 267 aaPredicted RBP12.66□□□□□ -0.38
SF3B5-201ENST00000367569 OR4A8P0C604 315 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 SLC6A6P31641 620 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 CDKN2AP42771 156 aaKnown RBP12.66□□□□□ -0.38
SF3B5-201ENST00000367569 CENPAP49450 140 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 ZNF133P52736 654 aaPredicted RBP12.66□□□□□ -0.38
SF3B5-201ENST00000367569 ERVS71-1P61550 626 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 MRPS34P82930 218 aaKnown RBP12.66□□□□□ -0.38
SF3B5-201ENST00000367569 HSF2Q03933 536 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 TSPAN31Q12999 210 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 DAG1Q14118 895 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 SLC36A2Q495M3 483 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 PABPC1L2AQ5JQF8 200 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 ZNF770Q6IQ21 691 aaPredicted RBP12.66□□□□□ -0.38
SF3B5-201ENST00000367569 C1orf94Q6P1W5 598 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 LEG1Q6P5S2 330 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 SVOPLQ8N434 492 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 ICA1LQ8NDH6 482 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 SLC30A7Q8NEW0 376 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 OR10G2Q8NGC3 310 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 GPX7Q96SL4 187 aaPredicted RBP12.66□□□□□ -0.38
SF3B5-201ENST00000367569 NMNAT3Q96T66 252 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 SMURF2Q9HAU4 748 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 ARMC1Q9NVT9 282 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 CDH10Q9Y6N8 788 aa12.66□□□□□ -0.38
SF3B5-201ENST00000367569 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
SF3B5-201ENST00000367569 AQP12BA6NM10 295 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 DCTN6O00399 190 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 GNGT2O14610 69 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 SSX4O60224 188 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 FKBP6O75344 327 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 CRLF1O75462 422 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 TIPRLO75663 272 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 HIST1H1CP16403 213 aaKnown RBP12.65□□□□□ -0.38
SF3B5-201ENST00000367569 CCNOP22674 350 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 APOBEC3AP31941 199 aaPredicted RBP12.65□□□□□ -0.38
SF3B5-201ENST00000367569 IFNGR2P38484 337 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 RPS6KA3P51812 740 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 CBX1P83916 185 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 ENDOGQ14249 297 aaKnown RBP12.65□□□□□ -0.38
SF3B5-201ENST00000367569 MEP1BQ16820 701 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 RFX4Q33E94 735 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 THEM4Q5T1C6 240 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 ZNF544Q6NX49 715 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 DPY19L2P2Q6ZN68 376 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 AQP12AQ8IXF9 295 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 FAM169BQ8N8A8 192 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 NIPSNAP1Q9BPW8 284 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 SYT3Q9BQG1 590 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 REG4Q9BYZ8 158 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 NUAK2Q9H093 628 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 CDH20Q9HBT6 801 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 RPRD1BQ9NQG5 326 aaKnown RBP12.65□□□□□ -0.38
SF3B5-201ENST00000367569 POLE4Q9NR33 117 aa12.65□□□□□ -0.38
SF3B5-201ENST00000367569 COA3Q9Y2R0 106 aaPredicted RBP12.65□□□□□ -0.38
SF3B5-201ENST00000367569 FBN1P35555 2871 aaKnown RBP12.64□□□□□ -0.39
SF3B5-201ENST00000367569 TCRBV3S1A0A5B6 114 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 E2F6O75461 281 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 KRT36O76013 467 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 NR2C1P13056 603 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 MSR1P21757 451 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 NOS3P29474 1203 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 GALK2Q01415 458 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 GLO1Q04760 184 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 MAD2L1BPQ15013 274 aaPredicted RBP12.64□□□□□ -0.39
SF3B5-201ENST00000367569 MICAQ29983 383 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 MST1LQ2TV78 715 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 ALKBH6Q3KRA9 238 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 C3orf36Q3SXR2 165 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 GPR139Q6DWJ6 353 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms