RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CCNOP22674 350 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 COX15Q7KZN9 410 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 DOCK8Q8NF50 2099 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 C1orf61Q13536 156 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC9A3R2Q15599 337 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 PAN3Q58A45 887 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 EXOSC6Q5RKV6 272 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 NMNAT2Q9BZQ4 307 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 H7C1Q1 480 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 PPT1P50897 306 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 IDH3GP51553 393 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 FAM53BQ14153 422 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 LIX1LQ8IVB5 337 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR11A1Q9GZK7 315 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 TMEM184BQ9Y519 407 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 MSTNO14793 375 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 DSCR3O14972 297 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 NDUFB6O95139 128 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 GLYR1Q49A26 553 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 OPN5Q6U736 354 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 IL34Q6ZMJ4 242 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 STAC2Q6ZMT1 411 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 MVB12AQ96EY5 273 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 HAO2Q9NYQ3 351 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 B3GALT5Q9Y2C3 310 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR10A3P58181 314 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 FBXW12Q6X9E4 464 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 RABEPKQ7Z6M1 372 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 PLPP5Q8NEB5 264 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 VAMP5O95183 116 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR2G2Q8NGZ5 317 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 BADQ92934 168 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 MEIKINA0A087WXM9 373 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 CD38P28907 300 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 GABREP78334 506 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 FBXO46Q6PJ61 603 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 RBMS3Q6XE24 437 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 TRILQ7L0X0 811 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 ARHGEF39Q8N4T4 335 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR6K3Q8NGY3 331 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 BAHD1Q8TBE0 780 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 RHBDD3Q9Y3P4 386 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 SPTAN1Q13813 2472 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 HOXB5P09067 269 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 MRPL21Q7Z2W9 205 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 A0A0B4J2E0 115 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 LOC107986453A0A1B0GWG9 222 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 A0A1B0GX12 115 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 CD300LBA8K4G0 201 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 H0YIG0 161 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 CTSLP07711 333 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 SFTPDP35247 375 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 TGFBR3Q03167 851 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 PMPCAQ10713 525 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 SQSTM1Q13501 440 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 DOK3Q7L591 496 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 EMG1Q92979 244 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 TOE1Q96GM8 510 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 CMSS1Q9BQ75 279 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 C19orf12Q9NSK7 152 aa10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 PLEKHB1Q9UF11 243 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-202ENST00000366764 EP300Q09472 2414 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 TGOLN2O43493 480 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 BCL2L11O43521 198 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 PRKRAO75569 313 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 MTCP1P56278 107 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 IAH1Q2TAA2 248 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 TMPRSS9Q7Z410 1059 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 CLRN3Q8NCR9 226 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 CNRIP1Q96F85 164 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 VDAC3Q9Y277 283 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 B3GNTL1Q67FW5 361 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 KCNIP4Q6PIL6 250 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF761Q86XN6 746 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 TXNIPQ9H3M7 391 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 RNF150Q9ULK6 438 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC17A4Q9Y2C5 497 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 DFFBO76075 338 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 GSTP1P09211 210 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 IGFBP6P24592 240 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 TAS2R30P59541 319 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 AANATQ16613 207 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 BBS1Q8NFJ9 593 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 CHRNA9Q9UGM1 479 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF107Q9UII5 783 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ADAM10O14672 748 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 AKR7A2O43488 359 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 SOX18P35713 384 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 PPICP45877 212 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ADPRHP54922 357 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 UBE2KP61086 200 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 GPR157Q5UAW9 335 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 DTWD2Q8NBA8 298 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 UPRTQ96BW1 309 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 MYEF2Q9P2K5 600 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR5K3A6NET4 321 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms