RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CLDN20P56880 219 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 RASGEF1BQ0VAM2 473 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 CAMK2DQ13557 499 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 ZNF829Q3KNS6 432 aaPredicted RBP12□□□□□ -0.49
CCDC197-201ENST00000359253 YIF1BQ5BJH7 314 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 C10orf128Q5T292 105 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 ABLIM2Q6H8Q1 611 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 C22orf42Q6IC83 251 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 ARL9Q6T311 187 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 IGFL3Q6UXB1 125 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 TPRA1Q86W33 373 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 YIPF7Q8N8F6 280 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 ABHD4Q8TB40 342 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 THEM6Q8WUY1 208 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 AP3S1Q92572 193 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 ABTB1Q969K4 478 aaPredicted RBP12□□□□□ -0.49
CCDC197-201ENST00000359253 TMEM203Q969S6 136 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 MCHR2Q969V1 340 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 PGLYRP3Q96LB9 341 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 TM9SF2Q99805 663 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 EMC6Q9BV81 110 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 TMED9Q9BVK6 235 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 CDADC1Q9BWV3 514 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 HES7Q9BYE0 225 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 WDR12Q9GZL7 423 aaKnown RBP12□□□□□ -0.49
CCDC197-201ENST00000359253 RNF122Q9H9V4 155 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 PLGRKTQ9HBL7 147 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 MGAQ8IWI9 3026 aa12□□□□□ -0.49
CCDC197-201ENST00000359253 OR6C65A6NJZ3 312 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SMAD9O15198 467 aaKnown RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 CXCL13O43927 109 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SLC43A1O75387 559 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SC5DO75845 299 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ARL6IP5O75915 188 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SYNGR4O95473 234 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ABHD16AO95870 558 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SPARCP09486 303 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 S100A5P33763 92 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 MAGEA5P43359 124 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 EIF1AXP47813 144 aaKnown RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 GDI2P50395 445 aaKnown RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 LSM6P62312 80 aaKnown RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ALKBH1Q13686 389 aaKnown RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ZNF846Q147U1 533 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 STK11Q15831 433 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ETFDHQ16134 617 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 LIPNQ5VXI9 398 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ZADH2Q8N4Q0 377 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ZFP41Q8N8Y5 198 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 OR6Q1Q8NGQ2 317 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 OR6N1Q8NGY5 312 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 NEIL3Q8TAT5 605 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 RNF128Q8TEB7 428 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 GHSRQ92847 366 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SLC25A46Q96AG3 418 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 TMEM45BQ96B21 275 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ABHD17AQ96GS6 310 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 OR2M2Q96R28 347 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 HDHD5Q9BXW7 423 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SRXN1Q9BYN0 137 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SLC25A18Q9H1K4 315 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 NIPAL2Q9H841 368 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ZDHHC11Q9H8X9 412 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 PALMDQ9NP74 551 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 B3GAT2Q9NPZ5 323 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 PARPBPQ9NWS1 579 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 MRM2Q9UI43 246 aaKnown RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 IKZF2Q9UKS7 526 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 MCTS1Q9ULC4 181 aaKnown RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 ZNF281Q9Y2X9 895 aa11.99□□□□□ -0.49
CCDC197-201ENST00000359253 SIRT4Q9Y6E7 314 aaPredicted RBP11.99□□□□□ -0.49
CCDC197-201ENST00000359253 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 TRAV1-2A0A0B4J238 106 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 PNMA8CA0A1B0GUJ8 204 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 TMEM212A6NML5 194 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 CLDN25C9JDP6 229 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 E9PI62 339 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 RAMP1O60894 148 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 UPK3AO75631 287 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 CDRT1O95170 752 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 QDPRP09417 244 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 INHBBP09529 407 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 CPN1P15169 458 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 MAPK3P27361 379 aaPredicted RBP11.98□□□□□ -0.49
CCDC197-201ENST00000359253 RPS19P39019 145 aaKnown RBP11.98□□□□□ -0.49
CCDC197-201ENST00000359253 ZNF84P51523 738 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 RIDAP52758 137 aaKnown RBP11.98□□□□□ -0.49
CCDC197-201ENST00000359253 CLDN15P56746 228 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 CLDN18P56856 261 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 SLC3A1Q07837 685 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 DCTN2Q13561 401 aaKnown RBP11.98□□□□□ -0.49
CCDC197-201ENST00000359253 EIF2B1Q14232 305 aaKnown RBP11.98□□□□□ -0.49
CCDC197-201ENST00000359253 SOWAHCQ53LP3 525 aaPredicted RBP11.98□□□□□ -0.49
CCDC197-201ENST00000359253 RIPPLY2Q5TAB7 128 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 LYPD4Q6UWN0 246 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 UNQ9370/PRO34162Q6UXP9 181 aa11.98□□□□□ -0.49
CCDC197-201ENST00000359253 TMEM91Q6ZNR0 172 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms