RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 JSRP1Q96MG2 331 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 TMEM68Q96MH6 324 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 SORCS2Q96PQ0 1159 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 RBP7Q96R05 134 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 TXNL4BQ9NX01 149 aaKnown RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 AKAP7Q9P0M2 348 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 NXT1Q9UKK6 140 aaKnown RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 CHCHD2Q9Y6H1 151 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 SHISA3A0PJX4 238 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 B4E171 279 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 H7C2Y5 167 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 RNF13O43567 381 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 HPGDSO60760 199 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 CD14P08571 375 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SHC1P29353 583 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 PRPS1P60891 318 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 C17orf67Q0P5P2 114 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 OR7A5Q15622 319 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 PAN3Q58A45 887 aaKnown RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 PLET1Q6UQ28 207 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 PPP1R32Q7Z5V6 425 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 GNRHR2Q96P88 292 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 DDOQ99489 341 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 STUB1Q9UNE7 303 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SF3B6Q9Y3B4 125 aaKnown RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 WIF1Q9Y5W5 379 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 TRAV36DV7A0A075B6V5 113 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 A0A0G2JMM0 328 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 A0A1W2PPB8 328 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 A0A1W2PRS3 328 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 FAM74A7A6NL05 159 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 KIR3DP1A8MWS1 328 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 NCR1O76036 304 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 DKK1O94907 266 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 CFDP00746 253 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 FBXO45P0C2W1 286 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SOX6P35712 828 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 ACVR1BP36896 505 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 RRAS2P62070 204 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 FAM74A3Q4VXF1 159 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 ARL9Q6T311 187 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 C6orf15Q6UXA7 325 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 WDSUB1Q8N9V3 476 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 LRFN5Q96NI6 719 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 PAPOLGQ9BWT3 736 aaKnown RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 STRADBQ9C0K7 418 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 BABAM2Q9NXR7 383 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 NCDNQ9UBB6 729 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 GRHPRQ9UBQ7 328 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SESN1Q9Y6P5 492 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 V9GYH0 126 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 MAP1BP46821 2468 aaKnown RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 PHF3Q92576 2039 aaKnown RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 A0A1W2PNR3 127 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 H3BSH0 61 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 NPIPB7O75200 414 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 CDRT1O95170 752 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 MPC2O95563 127 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 HIST1H2ABP04908 130 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 ACAA1P09110 424 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 TFPIP10646 304 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SSTR2P30874 369 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SFTPDP35247 375 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SLC3A1Q07837 685 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 NTRK2Q16620 822 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 RNLSQ5VYX0 342 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 HIST3H2AQ7L7L0 130 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 OVCH2Q7RTZ1 564 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 OR6V1Q8N148 313 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 EDARADDQ8WWZ3 215 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 HIST1H2ACQ93077 130 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF251Q9BRH9 671 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 GSX2Q9BZM3 304 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF700Q9H0M5 742 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 CLEC4MQ9H2X3 399 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-202ENST00000358966 NIT2Q9NQR4 276 aa11.37□□□□□ -0.59
GGPS1-202ENST00000358966 SPAARA0A1B0GVQ0 90 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 ANKUB1A6NFN9 424 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 MFSD2BA6NFX1 497 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 KRBOX1C9JBD0 128 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
GGPS1-202ENST00000358966 MT-CO3P00414 261 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 SDHAP31040 664 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 SDC2P34741 201 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 PSMB10P40306 273 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 STARP49675 285 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 PSPHP78330 225 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 FAM69AQ5T7M9 428 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 DEFB124Q8NES8 71 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 OR5T2Q8NGG2 359 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 KLHDC2Q9Y2U9 406 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 NCKAP5O14513 1909 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 CACNA1GO43497 2377 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 A0A1W2PPK0 400 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 A8MVM7 634 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 LCN1P31025 176 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 ACKR1Q16570 336 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 LINC01590Q5TEZ4 76 aa11.36□□□□□ -0.59
GGPS1-202ENST00000358966 DMRTC2Q8IXT2 367 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms