RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 C20orf204Q6ZNR8 217 aa8.15□□□□□ -1.11
UPF2-202ENST00000357604 SATL1Q86VE3 508 aa8.15□□□□□ -1.11
UPF2-202ENST00000357604 GATAD2BQ8WXI9 593 aa8.15□□□□□ -1.11
UPF2-202ENST00000357604 HDAC2Q92769 488 aaKnown RBP8.15□□□□□ -1.11
UPF2-202ENST00000357604 GABARAPL3Q9BY60 117 aa8.15□□□□□ -1.11
UPF2-202ENST00000357604 OR51B6Q9H340 312 aa8.15□□□□□ -1.11
UPF2-202ENST00000357604 hCG_1809904A0A1W2PP81 198 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 A0A1W2PPE2 198 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 A0A1W2PR64 198 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 A0A1W2PRV1 198 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 HNF1AP20823 631 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 S100GP29377 79 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 PYCR1P32322 319 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 S100A5P33763 92 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 TALDO1P37837 337 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 BMXP51813 675 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 PCGF3Q3KNV8 242 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 GLT8D1Q68CQ7 371 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 ZNF322Q6U7Q0 402 aaPredicted RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 SLC22A24Q8N4F4 322 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 ATF6BQ99941 703 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 SLC52A3Q9NQ40 469 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 WASF3Q9UPY6 502 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 A1L4Q6 167 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 ZNF136P52737 540 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 RIPPLY1Q0D2K3 151 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 PGAP1Q75T13 922 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 DCXRQ7Z4W1 244 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 KBTBD8Q8NFY9 601 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 OR1J1Q8NGS3 322 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 KCNJ15Q99712 375 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 CLCF1Q9UBD9 225 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 SIGLEC7Q9Y286 467 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 CAB39Q9Y376 341 aaPredicted RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 H3BSA7 217 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 HRGP04196 525 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 ASAH2BP0C7U1 165 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 HIST1H1CP16403 213 aaKnown RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 SPI1P17947 270 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 UGT2B10P36537 528 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 HMGA2P52926 109 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 CYB561A3Q8NBI2 242 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 SLAMF6Q96DU3 332 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 C1QTNF6Q9BXI9 259 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 EMC7Q9NPA0 242 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 PLSCR4Q9NRQ2 329 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 VSX1Q9NZR4 365 aaPredicted RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 DNAJB11Q9UBS4 358 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 NUP210LQ5VU65 1888 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 PIKFYVEQ9Y2I7 2098 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 TMEM269A0A1B0GVZ9 245 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 TVP23AA6NH52 213 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 SELENOPP49908 381 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 OCLNQ16625 522 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 OGFRL1Q5TC84 451 aaPredicted RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 SP5Q6BEB4 398 aaPredicted RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 ZNF227Q86WZ6 799 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 MEX3DQ86XN8 651 aaKnown RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 LIPHQ8WWY8 451 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 BORCS8Q96FH0 119 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 PIMREGQ9BSJ6 248 aa8.14□□□□□ -1.11
UPF2-202ENST00000357604 CHMP1AQ9HD42 196 aaPredicted RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 CNOT2Q9NZN8 540 aaKnown RBP8.14□□□□□ -1.11
UPF2-202ENST00000357604 FAM171A2A8MVW0 826 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 RAB3AP20336 220 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 DAPP51397 102 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 PPP1R8Q12972 351 aaKnown RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 SNTB2Q13425 540 aaKnown RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 MOB3CQ70IA8 216 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 DOK3Q7L591 496 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 UTP4Q969X6 686 aaKnown RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 FBXO17Q96EF6 278 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 PLPPR2Q96GM1 343 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 C7orf34Q96L11 122 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 PAPOLGQ9BWT3 736 aaKnown RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 TMEM100Q9NV29 134 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 SEC14L4Q9UDX3 406 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 KCNE5Q9UJ90 142 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 CLDN16Q9Y5I7 305 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 GOLGB1Q14789 3259 aaKnown RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 J3QW42 95 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 KDM4BO94953 1096 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 PDGFAP04085 211 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 DSCR9P59020 149 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 PRR30Q53SZ7 412 aaPredicted RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 KDM4DQ6B0I6 523 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 PPP1R14AQ96A00 147 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 MS4A5Q9H3V2 200 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 ARPC4-TTLL3A0A0A6YYG9 625 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 A0A0G2JNJ9 132 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 ITGA5P08648 1049 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 DDOSTP39656 456 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 RPS4XP62701 263 aaKnown RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 C6orf52Q5T4I8 152 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 ANKRD34AQ69YU3 496 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 APOOLQ6UXV4 268 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 LRRC17Q8N6Y2 441 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 FOXRED1Q96CU9 486 aaPredicted RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 C4orf45Q96LM5 186 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 NDUFA13Q9P0J0 144 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms