RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 SLC2A1P11166 492 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 VAMP1P23763 118 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 MAS1LP35410 378 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 REEP5Q00765 189 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 DHCR24Q15392 516 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 EIPR1Q53HC9 387 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 AWAT2Q6E213 333 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 RTN4RL1Q86UN2 441 aaPredicted RBP7.12□□□□□ -1.27
CD46-203ENST00000354848 TRAPPC5Q8IUR0 188 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 OR51A4Q8NGJ6 313 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 OR5AR1Q8NGP9 310 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 C2orf15Q8WU43 125 aaKnown RBP7.12□□□□□ -1.27
CD46-203ENST00000354848 MRGPRFQ96AM1 343 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 FAM3DQ96BQ1 224 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 TCTN2Q96GX1 697 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 NKX3-1Q99801 234 aaPredicted RBP7.12□□□□□ -1.27
CD46-203ENST00000354848 NMES1Q9C002 83 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 RAB33BQ9H082 229 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 SYT4Q9H2B2 425 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 PARP11Q9NR21 331 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 ZDHHC8Q9ULC8 765 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 TP53TG5Q9Y2B4 290 aa7.12□□□□□ -1.27
CD46-203ENST00000354848 CLDN4O14493 209 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 UPK3AO75631 287 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 AK1P00568 194 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 CSNK2A2P19784 350 aaPredicted RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 PBX2P40425 430 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 EIF1AXP47813 144 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 SULT1A2P50226 295 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 SLC9A5Q14940 896 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 MRPL2Q5T653 305 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 GDPD4Q6W3E5 623 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 HEPN1Q6WQI6 88 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 Q6ZVU0 165 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 ZNF627Q7L945 461 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 DPPA2Q7Z7J5 298 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 GKN2Q86XP6 184 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 BHLHE23Q8NDY6 225 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 OR4S1Q8NGB4 309 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 OR5T3Q8NGG3 340 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 ZNF417Q8TAU3 575 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 ZPLD1Q8TCW7 415 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 INSM2Q96T92 566 aaPredicted RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 SMOC1Q9H4F8 434 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 SPACA1Q9HBV2 294 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 GDF2Q9UK05 429 aaPredicted RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 IER3IP1Q9Y5U9 82 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 CACNA1CQ13936 2221 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 TRBV5-7A0A0A0MS05 114 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 LOC100289279A0A1B0GTE1 492 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 C4orf51C9J302 202 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 AIFM1O95831 613 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 F10P00742 488 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 LRG1P02750 347 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 LAMP2P13473 410 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 RPS10P46783 165 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 DUSP8Q13202 625 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 ERV3-1Q14264 604 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 Q6ZNB5 142 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 Q6ZRG5 221 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 C19orf47Q8N9M1 422 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 PNLDC1Q8NA58 520 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 ADAD2Q8NCV1 583 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 GRHL3Q8TE85 626 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 MAFIPQ8WZ33 124 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 ROBO4Q8WZ75 1007 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 OR8D1Q8WZ84 308 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 NMNAT3Q96T66 252 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 MACROD1Q9BQ69 325 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 SUCNR1Q9BXA5 334 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 ZMAT3Q9HA38 289 aaKnown RBP7.11□□□□□ -1.27
CD46-203ENST00000354848 TAF9BQ9HBM6 251 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 PLA2G2EQ9NZK7 142 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 OR5AC2Q9NZP5 309 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 CES1P1Q9UKY3 287 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 HS3ST2Q9Y278 367 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 SCN2AQ99250 2005 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 SCN3AQ9NY46 2000 aa7.11□□□□□ -1.27
CD46-203ENST00000354848 DUXAA6NLW8 204 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 PLGP00747 810 aaPredicted RBP7.1□□□□□ -1.27
CD46-203ENST00000354848 ERCC1P07992 297 aaPredicted RBP7.1□□□□□ -1.27
CD46-203ENST00000354848 CTNNB1P35222 781 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 SLC26A5P58743 744 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 ADAM8P78325 824 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 RHEBQ15382 184 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 DUSP5Q16690 384 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 ODF4Q2M2E3 257 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 RPL7L1Q6DKI1 246 aaKnown RBP7.1□□□□□ -1.27
CD46-203ENST00000354848 OR2A2Q6IF42 318 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 ACOT4Q8N9L9 421 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 OR1J1Q8NGS3 322 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 LRFN5Q96NI6 719 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 ASB16Q96NS5 453 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 LMF1Q96S06 567 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 CDC6Q99741 560 aa7.1□□□□□ -1.27
CD46-203ENST00000354848 MRPL37Q9BZE1 423 aaKnown RBP7.1□□□□□ -1.27
CD46-203ENST00000354848 SLC5A7Q9GZV3 580 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms