RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FBXW4P57775 412 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 PPP3R1P63098 170 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ARG2P78540 354 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ZP4Q12836 540 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SNTA1Q13424 505 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 RIN1Q13671 783 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 CDK5R1Q15078 307 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 GXYLT1Q4G148 440 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ZNF684Q5T5D7 378 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 DDI2Q5TDH0 399 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 EEF1A1P5Q5VTE0 462 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 FAM205BPQ63HN1 556 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 MZT2AQ6P582 158 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 RPL22L1Q6P5R6 122 aaKnown RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 B3GLCTQ6Y288 498 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SSX6Q7RTT6 188 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SLC16A9Q7RTY1 509 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 KCTD20Q7Z5Y7 419 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SIAH3Q8IW03 269 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ARMC10Q8N2F6 343 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 RPRMLQ8N4K4 120 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ADPRHL1Q8NDY3 354 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 OR2T4Q8NH00 348 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 MFSD8Q8NHS3 518 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 NEIL3Q8TAT5 605 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ZNF519Q8TB69 540 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SETD6Q8TBK2 473 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 M1APQ8TC57 530 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ZPLD1Q8TCW7 415 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 DUSP19Q8WTR2 217 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ASB15Q8WXK1 588 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ACOT12Q8WYK0 555 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 PHYHIPQ92561 330 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 HAS2Q92819 552 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 NTNG2Q96CW9 530 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 KCTD12Q96CX2 325 aaKnown RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 SMIM19Q96E16 107 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ZMYND19Q96E35 227 aaPredicted RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 SPACA9Q96E40 222 aaPredicted RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 THOC3Q96J01 351 aaKnown RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 MRGPRX4Q96LA9 322 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 DCLRE1CQ96SD1 692 aaKnown RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 TBX5Q99593 518 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 KCNS3Q9BQ31 491 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 TMED9Q9BVK6 235 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 POTEKPQ9BYX7 375 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 RNF32Q9H0A6 362 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 FANCFQ9NPI8 374 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SDHAF3Q9NRP4 125 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 QPCTLQ9NXS2 382 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ETAA1Q9NY74 926 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 TAS2R5Q9NYW4 299 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 VSX1Q9NZR4 365 aaPredicted RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 GRHPRQ9UBQ7 328 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 WIF1Q9Y5W5 379 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 HS3ST3B1Q9Y662 390 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SIRT4Q9Y6E7 314 aaPredicted RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 V9GYH0 126 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ARID1AO14497 2285 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 IGHV1-45A0A0A0MS14 117 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 TRAV1-2A0A0B4J238 106 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 A6NIZ1 184 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 A6NNC1 897 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 J3QLW9 94 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 PLPP3O14495 311 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 CASKO14936 926 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 ZNF354AO60765 605 aaPredicted RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 GATBO75879 557 aaKnown RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 CLEC2LP0C7M8 214 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 COX6A1P12074 109 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 ZNF19P17023 458 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 MYL9P24844 172 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 FKBP2P26885 142 aaKnown RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 OR12D2P58182 307 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 DEFA1P59665 94 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 DEFA3P59666 94 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 RAP1BP61224 184 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 RPL27P61353 136 aaKnown RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 RAP1AP62834 184 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 SRSF2Q01130 221 aaKnown RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 GLYR1Q49A26 553 aaPredicted RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 STEAP3Q658P3 488 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 METAP1DQ6UB28 335 aaPredicted RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 LAX1Q8IWV1 398 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 TIGD4Q8IY51 512 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 GDPD1Q8N9F7 314 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 SYT14Q8NB59 555 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 PELI1Q96FA3 418 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 IMMP1LQ96LU5 166 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 FRMD6Q96NE9 622 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 SDHCQ99643 169 aaPredicted RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 TTYH2Q9BSA4 534 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 HDHD5Q9BXW7 423 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 DEFB126Q9BYW3 111 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 SRRQ9GZT4 340 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 MIXL1Q9H2W2 232 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 TXNIPQ9H3M7 391 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 KCNJ16Q9NPI9 418 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 RPRD1BQ9NQG5 326 aaKnown RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 BEX4Q9NWD9 120 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms