RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MFSD2BA6NFX1 497 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 SIGLEC5O15389 551 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 CDC40O60508 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 ALOX12BO75342 701 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 CSN2P05814 226 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 LIPCP11150 499 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 RORAP35398 523 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 ADAM8P78325 824 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 SIGLEC14Q08ET2 396 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 BTN1A1Q13410 526 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 SERTAD2Q14140 314 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 MOGAT2Q3SYC2 334 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 ZNF721Q8TF20 911 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 ASB5Q8WWX0 329 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 LAT2Q9GZY6 243 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 POFUT1Q9H488 388 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 EXOSC3Q9NQT5 275 aaKnown RBP16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 FBXO4Q9UKT5 387 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 WDFY3Q8IZQ1 3526 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 LOC100289279A0A1B0GTE1 492 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 LOC101059948A0A1B0GTJ6 334 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 F5H5P2 479 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 TSPAN4O14817 238 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 CSF1P09603 554 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 AKAIN1P0CW23 69 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 FAUP35544 74 aaKnown RBP16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 SPOCK1Q08629 439 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 TMEM225Q6GV28 225 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 PRSS42Q7Z5A4 293 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 KRT77Q7Z794 578 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 C9orf40Q8IXQ3 194 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 ZNF679Q8IYX0 411 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 GPR119Q8TDV5 335 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 SEH1LQ96EE3 360 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 TMPRSS13Q9BYE2 586 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 KIF25Q9UIL4 384 aa16.28■□□□□ 0.2
PTP4A3-202ENST00000349124 SLC17A2O00624 439 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 SDC3O75056 442 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 ZNF432O94892 652 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 IGKV3-11P04433 115 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 HOXD4P09016 255 aaPredicted RBP16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 GABRA1P14867 456 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 TSSK4Q6SA08 328 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 SHISA6Q6ZSJ9 500 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 GABRG1Q8N1C3 465 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 RELL2Q8NC24 303 aaPredicted RBP16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 SLC25A28Q96A46 364 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 ABHD6Q9BV23 337 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 APMAPQ9HDC9 416 aa16.27■□□□□ 0.2
PTP4A3-202ENST00000349124 NUPL2O15504 423 aaKnown RBP16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 SPDEFO95238 335 aa16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 NR0B2Q15466 257 aa16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 DEFB133Q30KQ1 61 aa16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 RNF128Q8TEB7 428 aa16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 C15orf40Q8WUR7 153 aa16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 C8orf44Q96CB5 159 aa16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 ZNF285Q96NJ3 590 aa16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 COA3Q9Y2R0 106 aaPredicted RBP16.27■□□□□ 0.19
PTP4A3-202ENST00000349124 TRAV36DV7A0A075B6V5 113 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 FITM1A5D6W6 292 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 OR6C65A6NJZ3 312 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 C10orf142B7Z368 130 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 ZNF28P17035 718 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 IL12BP29460 328 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 RPL27P61353 136 aaKnown RBP16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 CCINQ13939 588 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 EIF2B1Q14232 305 aaKnown RBP16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 FAM166AQ6J272 317 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 LINC00346Q8IVM7 164 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 OR4S1Q8NGB4 309 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 NKD1Q969G9 470 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 CCNL2Q96S94 520 aaPredicted RBP16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 PDE7BQ9NP56 450 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 EPHA6Q9UF33 1036 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 DHDHQ9UQ10 334 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 FARSAQ9Y285 508 aaKnown RBP16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 LOC100509620A0A075B734 347 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 IGLV1-36A0A0B4J1U3 117 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 RP2O75695 350 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC25A12O75746 678 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 FMODQ06828 376 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC18B1Q6NT16 456 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 LRFN4Q6PJG9 635 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 OR6M1Q8NGM8 313 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 GPX8Q8TED1 209 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 CMKLR1Q99788 373 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 CUTCQ9NTM9 273 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 EMC9Q9Y3B6 208 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 LRP12Q9Y561 859 aa16.26■□□□□ 0.19
PTP4A3-202ENST00000349124 A0A1W2PPC4 97 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 FRG2CA6NGY1 282 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TMEM150CB9EJG8 249 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 H0YIG0 161 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 CDK2AP1O14519 115 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TMEM127O75204 238 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 PPP3CBP16298 524 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TEX30Q5JUR7 227 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 C1orf189Q5VU69 101 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms