RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 UBALD2Q8IYN6 164 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 PLK3Q9H4B4 646 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 FLI1Q01543 452 aaPredicted RBP21.17■□□□□ 0.98
NPAS3-201ENST00000346562 SELENBP1Q13228 472 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 TESK1Q15569 626 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 ATF6BQ99941 703 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 KAT6AQ92794 2004 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 FIGNL2A6NMB9 653 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 KLKB1P03952 638 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 TRNP1Q6NT89 227 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 DHRS4L2Q6PKH6 230 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 BAGE3Q86Y29 109 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 BAGE2Q86Y30 109 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 C20orf85Q9H1P6 137 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 EMC4Q5J8M3 183 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 MS4A6EQ96DS6 147 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 SNX11Q9Y5W9 270 aa21.17■□□□□ 0.98
NPAS3-201ENST00000346562 VIRMAQ69YN4 1812 aaKnown RBP21.17■□□□□ 0.98
NPAS3-201ENST00000346562 GATA6Q92908 595 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 TRDV1A0A1B0GX56 115 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 OR51A4Q8NGJ6 313 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 DVL3Q92997 716 aaPredicted RBP21.16■□□□□ 0.98
NPAS3-201ENST00000346562 OR11A1Q9GZK7 315 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 CHST8Q9H2A9 424 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 OR51B4Q9Y5P0 310 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 POM121CA8CG34 1229 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 PLPP1O14494 284 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 SHHQ15465 462 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 SAXO2Q658L1 398 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 KDM4DQ6B0I6 523 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 DBX2Q6ZNG2 339 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 WFDC8Q8IUA0 241 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 SLC16A11Q8NCK7 471 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 LAT2Q9GZY6 243 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 C19orf53Q9UNZ5 99 aaPredicted RBP21.16■□□□□ 0.98
NPAS3-201ENST00000346562 TXNL1O43396 289 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 TBXA2RP21731 343 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 PAX6P26367 422 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 NPY4RP50391 375 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 POFUT1Q9H488 388 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 FGF22Q9HCT0 170 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 DAPP1Q9UN19 280 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 DEFB109BQ30KR1 87 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 SIAH3Q8IW03 269 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 EXD3Q8N9H8 876 aa21.16■□□□□ 0.98
NPAS3-201ENST00000346562 TMEM200CA6NKL6 621 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 H0YIG0 161 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 M0R082 166 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 CST9Q5W186 159 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 ALKAL2Q6UX46 152 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 PLXDC2Q6UX71 529 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 SLC25A21Q9BQT8 299 aaPredicted RBP21.15■□□□□ 0.98
NPAS3-201ENST00000346562 OSGIN2Q9Y236 505 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 SNRPGP62308 76 aaKnown RBP21.15■□□□□ 0.98
NPAS3-201ENST00000346562 THEM4Q5T1C6 240 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 MFRPQ9BY79 579 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 DSCR3O14972 297 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 QDPRP09417 244 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 OR8G2PQ6IF36 304 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 CPEB2Q7Z5Q1 589 aaKnown RBP21.15■□□□□ 0.98
NPAS3-201ENST00000346562 NIPSNAP3BQ9BS92 247 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 UBQLN3Q9H347 655 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 TMEM9BQ9NQ34 198 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 SLCO1B1Q9Y6L6 691 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 CRYAAP02489 173 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 GPR12P47775 334 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 SLC35A2P78381 396 aa21.15■□□□□ 0.98
NPAS3-201ENST00000346562 RANGRFQ9HD47 186 aaPredicted RBP21.15■□□□□ 0.98
NPAS3-201ENST00000346562 RBFOX1Q9NWB1 397 aaKnown RBP21.15■□□□□ 0.98
NPAS3-201ENST00000346562 DPTQ07507 201 aa21.14■□□□□ 0.98
NPAS3-201ENST00000346562 LRFN5Q96NI6 719 aa21.14■□□□□ 0.98
NPAS3-201ENST00000346562 TBC1D29Q9UFV1 150 aa21.14■□□□□ 0.98
NPAS3-201ENST00000346562 ATP1B1P05026 303 aa21.14■□□□□ 0.98
NPAS3-201ENST00000346562 DTYMKP23919 212 aa21.14■□□□□ 0.98
NPAS3-201ENST00000346562 OR2A14Q96R47 310 aa21.14■□□□□ 0.98
NPAS3-201ENST00000346562 EXO1Q9UQ84 846 aaKnown RBP21.14■□□□□ 0.98
NPAS3-201ENST00000346562 IDSB3KWA1 339 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 THBS1P07996 1170 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 CT45A10P0DMU9 189 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 GLRA1P23415 457 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 DUSP5Q16690 384 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 Q6ZSR9 355 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 DND1Q8IYX4 353 aaKnown RBP21.14■□□□□ 0.97
NPAS3-201ENST00000346562 KDM8Q8N371 416 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 HPNP05981 417 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 CD22P20273 847 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 SUMF1Q8NBK3 374 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 MED18Q9BUE0 208 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 EDEM2Q9BV94 578 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 C1QTNF6Q9BXI9 259 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 TEAD1P28347 426 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 MRPL19P49406 292 aaKnown RBP21.14■□□□□ 0.97
NPAS3-201ENST00000346562 OR10K1Q8NGX5 313 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 NIPSNAP1Q9BPW8 284 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 CRLF2Q9HC73 371 aa21.14■□□□□ 0.97
NPAS3-201ENST00000346562 TNFSF15O95150 251 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 TCRBP04435 133 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 SRFP11831 508 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 DUSP1P28562 367 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 CCSMST1Q4G0I0 132 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms