RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 RAB1BQ9H0U4 201 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 OR51B6Q9H340 312 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 DYNLRB1Q9NP97 96 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 IL20RAQ9UHF4 553 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 SLC22A23A1A5C7 686 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 DYNC1I1O14576 645 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 IMPA2O14732 288 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 SYNGR3O43761 229 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 SNAP29O95721 258 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 NR2C1P13056 603 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 LAP3P28838 519 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
HMGN3-202ENST00000344726 PSG4Q00888 419 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 GGTLC2Q14390 218 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 CARTPTQ16568 116 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 C16orf89Q6UX73 402 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 FNDC8Q8TC99 324 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 RASD2Q96D21 266 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
HMGN3-202ENST00000344726 PIMREGQ9BSJ6 248 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 C1orf198Q9H425 327 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 CDH20Q9HBT6 801 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 FBXO9Q9UK97 447 aaPredicted RBP12.38□□□□□ -0.43
HMGN3-202ENST00000344726 MXRA5Q9NR99 2828 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 COL6A5A8TX70 2615 aa12.38□□□□□ -0.43
HMGN3-202ENST00000344726 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 TEX13CA0A0J9YWL9 993 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 IQCMA0A1B0GVH7 501 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 A0A1W2PPL8 197 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 LYNX1G3V0Z9 82 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 NDUFS8O00217 210 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 NDUFB2O95178 105 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 STAMBPO95630 424 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 CLPTM1O96005 669 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 LYNX1P0DP58 116 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 DAOP14920 347 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 MXRA7P84157 204 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 SPIBQ01892 262 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 HSF2Q03933 536 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 PLP2Q04941 152 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 ENDOGQ14249 297 aaKnown RBP12.37□□□□□ -0.43
HMGN3-202ENST00000344726 TBC1D28Q2M2D7 210 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 RGS7BPQ6MZT1 257 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-202ENST00000344726 UGT2A3Q6UWM9 527 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 ZER1Q7Z7L7 766 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 NEU4Q8WWR8 484 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-202ENST00000344726 POM121L2Q96KW2 1035 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 ZNF570Q96NI8 536 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 GPX7Q96SL4 187 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-202ENST00000344726 WNT5BQ9H1J7 359 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 MYOZ1Q9NP98 299 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-202ENST00000344726 CCNB1IP1Q9NPC3 277 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 NRIP3Q9NQ35 241 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 POLE4Q9NR33 117 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 GRHPRQ9UBQ7 328 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 REV1Q9UBZ9 1251 aa12.37□□□□□ -0.43
HMGN3-202ENST00000344726 IGLV3-9A0A075B6K5 115 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 PRSS37A4D1T9 235 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 B2RBV5 119 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 M0R233 179 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 GADD45GO95257 159 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 FAM107AO95990 144 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 PTHP01270 115 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 FABP3P05413 133 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 CST2P09228 141 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 T-ENOLP0DO92 83 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 ZNF250P15622 560 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 CTLA4P16410 223 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 ITGA2P17301 1181 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 CCNOP22674 350 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 STOMP27105 288 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 SDHAP31040 664 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 IL2RGP31785 369 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 APLNRP35414 380 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 WNT5AP41221 380 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 UCP2P55851 309 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 KRR1Q13601 381 aaKnown RBP12.36□□□□□ -0.43
HMGN3-202ENST00000344726 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 TMEM255AQ5JRV8 349 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 CYP2R1Q6VVX0 501 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 RINLQ6ZS11 566 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 PTCHD4Q6ZW05 846 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 ZNF101Q8IZC7 436 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 MSI2Q96DH6 328 aaKnown RBP12.36□□□□□ -0.43
HMGN3-202ENST00000344726 NSL1Q96IY1 281 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 ZNF416Q9BWM5 594 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 OR2H1Q9GZK4 316 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 KCNN2Q9H2S1 579 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 EMC7Q9NPA0 242 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 IL1RAPQ9NPH3 570 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms