RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR4C45A6NMZ5 311 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 A8MWP6 167 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GLSO94925 669 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 EDNRAP25101 427 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 UBE2V2Q15819 145 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 DCAF15Q66K64 600 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 HOXB13Q92826 284 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ISOC2Q96AB3 205 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 C1QTNF3Q9BXJ4 246 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 C11orf54Q9H0W9 315 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 IL17BQ9UHF5 180 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CHD3Q12873 2000 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TNFSF11O14788 317 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 PPP1R17O96001 155 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CTSLP07711 333 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ACAA1P09110 424 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GDNFP39905 211 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 EMP2P54851 167 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SEC11AP67812 179 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MGAT2Q10469 447 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 STYXQ8WUJ0 223 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CPB2Q96IY4 423 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 C4orf36Q96KX1 117 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 RAB18Q9NP72 206 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 FOXJ2Q9P0K8 574 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 VPS29Q9UBQ0 182 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 DNAJC15Q9Y5T4 150 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CSTBP04080 98 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MPSTP25325 297 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SRP14P37108 136 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TAS2R45P59539 299 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CRMP1Q14194 572 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GRB7Q14451 532 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SMN1Q16637 294 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM217Q8N7C4 229 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 RAX2Q96IS3 184 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 RBP7Q96R05 134 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 C20orf24Q9BUV8 137 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TMPRSS4Q9NRS4 437 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 EVA1BQ9NVM1 165 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 FNDC3AQ9Y2H6 1198 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 PTPRAP18433 802 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MGAT1P26572 445 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 LCN2P80188 198 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GSG1Q2KHT4 349 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MTMR14Q8NCE2 650 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR4S1Q8NGB4 309 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR9A1PQ8NGU1 263 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 APH1AQ96BI3 265 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 NTPCRQ9BSD7 190 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TBX21Q9UL17 535 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ADRA2AP08913 450 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 FGF3P11487 239 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SUB1P53999 127 aaKnown RBP eCLIP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM176BQ3YBM2 270 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CPA6Q8N4T0 437 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF383Q8NA42 475 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR4C16Q8NGL9 310 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 BCL2L2Q92843 193 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 NAT8Q9UHE5 227 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TFPIP10646 304 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 KCTD11Q693B1 232 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ZFAND6Q6FIF0 208 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MRPL24Q96A35 216 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SPON2Q9BUD6 331 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SLC17A9Q9BYT1 436 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 Q9N2K0 584 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 AQP7P3A6NL99 342 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GABRB1P18505 474 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GPR3P46089 330 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 P2RX1P51575 399 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 POM121Q96HA1 1249 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 BMFQ96LC9 184 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CHST5Q9GZS9 411 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CSTL1Q9H114 145 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MYH13Q9UKX3 1938 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 A0A1B0GV90 55 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 NCBP2LA6PVI3 153 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GYPAP02724 150 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM267Q0VDI3 215 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 LRRC18Q8N456 261 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR5AK3PQ8NH89 298 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TRIB1Q96RU8 372 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 NSG2Q9Y328 171 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SNX11Q9Y5W9 270 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TRBV2A0A0J9YWF9 115 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CT45A10P0DMU9 189 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SFTPDP35247 375 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 STK19P49842 368 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 XKR7Q5GH72 579 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 PARM1Q6UWI2 310 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 UNC93AQ86WB7 457 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 UBALD2Q8IYN6 164 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 WFIKKN2Q8TEU8 576 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM239Q8WW34 195 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MRPS2Q9Y399 296 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SDK1Q7Z5N4 2213 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TRAV30A0A087WSZ9 112 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR8G3PP0DMU2 310 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF823P16415 610 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms