RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 YIPF7Q8N8F6 280 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 C1orf162Q8NEQ5 155 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 FOXN4Q96NZ1 517 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 YTHDF1Q9BYJ9 559 aaKnown RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 YIPF3Q9GZM5 350 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ESRP2Q9H6T0 727 aaKnown RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 MED20Q9H944 212 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 WDR76Q9H967 626 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 PLSCR4Q9NRQ2 329 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 MALT1Q9UDY8 824 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ALPK2Q86TB3 2170 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ZNF593O00488 134 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 PRKYO43930 277 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 CLIC3O95833 236 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 PGA4P0DJD7 388 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 PGA3P0DJD8 388 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 HTR1FP30939 366 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 CDKN2AP42771 156 aaKnown RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 FMODQ06828 376 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 PIGFQ07326 219 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 MAD2L1BPQ15013 274 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 TBRG1Q3YBR2 411 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ZNF691Q5VV52 312 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 C12orf73Q69YU5 71 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 SPATC1Q76KD6 591 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 CXorf67Q86X51 503 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 SLC35F2Q8IXU6 374 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 HSD17B8Q92506 261 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 HDHD2Q9H0R4 259 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ELOVL3Q9HB03 270 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 B3GAT1Q9P2W7 334 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ASH2LQ9UBL3 628 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 DOK2O60496 412 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ANXA2P07355 339 aaKnown RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 TSPAN19P0C672 248 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 LSM6P62312 80 aaKnown RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 RAB1AP62820 205 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 RAB40BQ12829 278 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 OCLNQ16625 522 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 SFRP5Q5T4F7 317 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 ZNF511Q8NB15 262 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 TFAP2CQ92754 450 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 TMEM80Q96HE8 168 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 TSSK2Q96PF2 358 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 KCNK17Q96T54 332 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 RSPO3Q9BXY4 272 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 COMMD4Q9H0A8 199 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 EMC7Q9NPA0 242 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 INPP5EQ9NRR6 644 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 TMEM38BQ9NVV0 291 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 VSX1Q9NZR4 365 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-202ENST00000343975 SCOCQ9UIL1 159 aa7.2□□□□□ -1.26
HMGCR-202ENST00000343975 CPAMD8Q8IZJ3 1885 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 M0R129 80 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 M0R1B8 84 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 ENTPD6O75354 484 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 CTLA4P16410 223 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 PSMB1P20618 241 aaKnown RBP7.19□□□□□ -1.26
HMGCR-202ENST00000343975 GCH1P30793 250 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 KIR2DL3P43628 341 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 UQCRFS1P47985 274 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 PRKXP51817 358 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 FOXF2Q12947 444 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 SLC16A9Q7RTY1 509 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 DPY19L4Q7Z388 723 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 SLC22A24Q8N4F4 322 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 ZNF519Q8TB69 540 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 C11orf40Q8WZ69 217 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 STARD4Q96DR4 205 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 PGAM5Q96HS1 289 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 COG8Q96MW5 612 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 TEAD3Q99594 435 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 COMMD3-BMI1R4GMX3 469 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 A0A087WXM4 84 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 OR6C68A6NDL8 312 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 A8MXE2 369 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 F5H5K5 113 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 TBX1O43435 398 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 ATE1O95260 518 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 ABHD16AO95870 558 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 LCATP04180 440 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 ERCC1P07992 297 aaPredicted RBP7.19□□□□□ -1.26
HMGCR-202ENST00000343975 CCDC159P0C7I6 412 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 OR2T7P0C7T2 308 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 AGAP20933 346 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 MRPL28Q13084 256 aaKnown RBP7.19□□□□□ -1.26
HMGCR-202ENST00000343975 C6orf141Q5SZD1 244 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 FTMTQ8N4E7 242 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 OR2T27Q8NH04 317 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 RHOXF1Q8NHV9 184 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 CNIH3Q8TBE1 160 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 RORBQ92753 470 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 ZNF524Q96C55 264 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 ANKRD60Q9BZ19 345 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 PLEKHA1Q9HB21 404 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 BRD7Q9NPI1 651 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 POLE4Q9NR33 117 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 GRIP1Q9Y3R0 1128 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 CACNA1CQ13936 2221 aa7.19□□□□□ -1.26
HMGCR-202ENST00000343975 CCDC160A6NGH7 325 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms