RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 LY6G5CQ5SRR4 150 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 GJC3Q8NFK1 279 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 TMEM208Q9BTX3 173 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 TRIM77I1YAP6 450 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 DMRT3Q9NQL9 472 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 ZNF835Q9Y2P0 537 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 FREM3P0C091 2139 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 G3V3Y1 287 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 K7ERU9 68 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 CD276Q5ZPR3 534 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 MBD3L1Q8WWY6 194 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 TAAR6Q96RI8 345 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 TMEM265A0A087WTH1 108 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 FGF18O76093 207 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 PTBP1P26599 531 aaKnown RBP eCLIP16.31■□□□□ 0.23e-11■■■■□ 21.8
SMAD4-201ENST00000342988 EPHA2P29317 976 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 GDNFP39905 211 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 ERVPABLB-1P60509 514 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 EDDM3AQ14507 147 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 EXTL1Q92935 676 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 OR8B4Q96RC9 309 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 ULBP3Q9BZM4 244 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 ASH2LQ9UBL3 628 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 CSAG2Q9Y5P2 127 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 PEAK1Q9H792 1746 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 F5H697 171 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 PEX10O60683 326 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 AHRP35869 848 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 WDR31Q8NA23 367 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 TMEM178AQ8NBL3 297 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 POU2F2P09086 479 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 WDR73Q6P4I2 378 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 DRAM2Q6UX65 266 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 TP53RKQ96S44 253 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ZDHHC18Q9NUE0 388 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 PDGFAP04085 211 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 OR1D4P47884 311 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ENTPD8Q5MY95 495 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ZNF787Q6DD87 383 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 LSRQ86X29 649 aaPredicted RBP16.3■□□□□ 0.2
SMAD4-201ENST00000342988 FAM174AQ8TBP5 190 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 COL5A1-AS1Q5SY13 56 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ZNF813Q6ZN06 617 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ACOT7LQ6ZUV0 252 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 DOLPP1Q86YN1 238 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 HSD17B8Q92506 261 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 OR1Q1Q15612 314 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 RTL8AQ9BWD3 113 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 NOX4Q9NPH5 578 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 TCRBV7S3A2A0A539 114 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ELAVL4P26378 380 aaKnown RBP16.3■□□□□ 0.2
SMAD4-201ENST00000342988 LGALS14Q8TCE9 139 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 SEC22AQ96IW7 307 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ZNF264O43296 627 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 FGF7P21781 194 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 RING1Q06587 406 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 ELOBQ15370 118 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 FER1L6-AS2Q96M78 137 aa16.3■□□□□ 0.2
SMAD4-201ENST00000342988 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.29■□□□□ 0.2
SMAD4-201ENST00000342988 MYOCOSA0A1B0GUC4 107 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.29■□□□□ 0.2
SMAD4-201ENST00000342988 CPEP16870 476 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 PPP1CAP62136 330 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 TRAV27A0A087WT01 109 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 A0A1B0GTW7 788 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 PIAS2O75928 621 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 EDN3P14138 238 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 CST6Q15828 149 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 SYPL2Q5VXT5 272 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 USP53Q70EK8 1073 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 ADOQ96SZ5 270 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 SLC17A9Q9BYT1 436 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 NFAT5O94916 1531 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 A0A0D9SEW6 157 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 A0A1W2PQU0 124 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 HS3ST1O14792 307 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 MFAP5Q13361 173 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 ECM1Q16610 540 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 ZFP62Q8NB50 900 aaPredicted RBP16.29■□□□□ 0.2
SMAD4-201ENST00000342988 AKR7LQ8NHP1 331 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 TTC9Q92623 222 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 CPEB1Q9BZB8 566 aaKnown RBP16.29■□□□□ 0.2
SMAD4-201ENST00000342988 GPR37O15354 613 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 AOAHP28039 575 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 SRSF9Q13242 221 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMAD4-201ENST00000342988 MLF2Q15773 248 aaPredicted RBP16.29■□□□□ 0.2
SMAD4-201ENST00000342988 C17orf78Q8N4C9 275 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 IER2Q9BTL4 223 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 OR2T8A6NH00 312 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 M0R3E3 92 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 FGF3P11487 239 aaPredicted RBP16.29■□□□□ 0.2
SMAD4-201ENST00000342988 C17orf67Q0P5P2 114 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 PRSS3P2Q8NHM4 247 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 NCKAP5O14513 1909 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 DLX1P56177 255 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 NPY5RQ15761 445 aa16.29■□□□□ 0.2
SMAD4-201ENST00000342988 ADIPOQQ15848 244 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms