RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CHRNB1P11230 501 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SDHBP21912 280 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 KCNJ8Q15842 424 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 C3orf49Q96BT1 292 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 RIMS4Q9H426 269 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-202ENST00000342494 TAS2R16Q9NYV7 291 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 KIR2DS1A0A191URI9 304 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 MEIOCA2RUB1 952 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 LCMT2O60294 686 aaKnown RBP13.72□□□□□ -0.21
UBE3B-202ENST00000342494 LGI1O95970 557 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 KIR2DS4P43632 304 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 PMPCAQ10713 525 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 KIR2DS1Q14954 304 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 AARDQ4LEZ3 155 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 DHRS4L2Q6PKH6 230 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 OR52I1Q8NGK6 324 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 OR10X1Q8NGY0 326 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 CMTM2Q8TAZ6 248 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 NANPQ8TBE9 248 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SUCNR1Q9BXA5 334 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 ZMAT3Q9HA38 289 aaKnown RBP13.72□□□□□ -0.21
UBE3B-202ENST00000342494 WNT16Q9UBV4 365 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 PMP2P02689 132 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 FABP1P07148 127 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 PIPP12273 146 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-202ENST00000342494 FCRL6Q6DN72 434 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 DHRS13Q6UX07 377 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 DPPA2Q7Z7J5 298 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 CNTNAP3Q9BZ76 1288 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 IL21Q9HBE4 155 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 SLC5A6Q9Y289 635 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 YIF1AO95070 293 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 FAM157BP0CG42 384 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 FAM53BQ14153 422 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 Q6ZNB5 142 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 OR11G2Q8NGC1 345 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 PHYHIPQ92561 330 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF705FA8MVS1 300 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF705DP0CH99 300 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF705BP0CI00 300 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-202ENST00000342494 ACHEP22303 614 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 GABRA4P48169 554 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 GNB1P62873 340 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 ACKR1Q16570 336 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 WDR88Q6ZMY6 472 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 RBM45Q8IUH3 476 aaKnown RBP13.71□□□□□ -0.21
UBE3B-202ENST00000342494 KLHDC8BQ8IXV7 354 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 SAT2Q96F10 170 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-202ENST00000342494 ERVMER34-1Q9H9K5 563 aa13.71□□□□□ -0.21
UBE3B-202ENST00000342494 TXNL4BQ9NX01 149 aaKnown RBP13.71□□□□□ -0.21
UBE3B-202ENST00000342494 GLRA1P23415 457 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 RAP2BP61225 183 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 THEM4Q5T1C6 240 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 ENTHD1Q8IYW4 607 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 GINS3Q9BRX5 216 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 C1QTNF3Q9BXJ4 246 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 SLC22A11Q9NSA0 550 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 HRO43593 1189 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 GLAP06280 429 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 OR8U8P0C7N1 319 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.22
UBE3B-202ENST00000342494 SUB1P53999 127 aaKnown RBP eCLIP13.71□□□□□ -0.22
UBE3B-202ENST00000342494 SPCS2Q15005 226 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.71□□□□□ -0.22
UBE3B-202ENST00000342494 PHLDA2Q53GA4 152 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 NLRC3Q7RTR2 1065 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 NLRP8Q86W28 1048 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 SLAMF6Q96DU3 332 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 LRRC61Q9BV99 259 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 OPA3Q9H6K4 179 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 FAM53CQ9NYF3 392 aa13.71□□□□□ -0.22
UBE3B-202ENST00000342494 MYO18AQ92614 2054 aaKnown RBP13.7□□□□□ -0.22
UBE3B-202ENST00000342494 HMGN4O00479 90 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 SH2D1BO14796 132 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 CTSLP07711 333 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 STEAP1BQ6NZ63 245 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 SPRED1Q7Z699 444 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 DEFB124Q8NES8 71 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 BSCL2Q96G97 398 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-202ENST00000342494 SLCO5A1Q9H2Y9 848 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 KCNIP2Q9NS61 270 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 SLC39A9Q9NUM3 307 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 WSB2Q9NYS7 404 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-202ENST00000342494 CGGBP1Q9UFW8 167 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-202ENST00000342494 LILRA5A6NI73 299 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 TNFSF11O14788 317 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 ARNTP27540 789 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 TRILQ7L0X0 811 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 OR52N1Q8NH53 320 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 OR51F2Q8NH61 342 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 PCED1AQ9H1Q7 454 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 BIN3Q9NQY0 253 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 F6UZH7 168 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF195O14628 629 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 EIF3IQ13347 325 aaKnown RBP13.7□□□□□ -0.22
UBE3B-202ENST00000342494 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 TCTN3Q6NUS6 607 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 TMEM81Q6P7N7 255 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 KCNIP4Q6PIL6 250 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms