RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 DNASE1P24855 282 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 DAP3P51398 398 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CLDN20P56880 219 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 COPZ1P61923 177 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CBX3Q13185 183 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 IL18R1Q13478 541 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FLOT2Q14254 428 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 NDUFAF6Q330K2 333 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SLC25A47Q6Q0C1 308 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 B3GNT6Q6ZMB0 384 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FCRLAQ7L513 359 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ABHD12BQ7Z5M8 362 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 C1QL4Q86Z23 238 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 RPS4Y2Q8TD47 263 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SMPDL3BQ92485 455 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZHX1-C8orf76Q96EF9 292 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SGTBQ96EQ0 304 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CENPNQ96H22 339 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 BDH2Q9BUT1 245 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 TINAGL1Q9GZM7 467 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF696Q9H7X3 374 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 BARX1Q9HBU1 254 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 S100A14Q9HCY8 104 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF71Q9NQZ8 489 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 LIN7CQ9NUP9 197 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 PARPBPQ9NWS1 579 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 B3GNT2Q9NY97 397 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 KLHL21Q9UJP4 597 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 MED31Q9Y3C7 131 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ABCA12Q86UK0 2595 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 TEX15Q9BXT5 2789 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FAM90A7PA6NKC0 464 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZAR1LA6NP61 321 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF785A8K8V0 405 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 C17orf51A8MQB3 221 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FAM166BA8MTA8 275 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FAM90A22PA8MWA6 464 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FAM90A12PA8MX19 464 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FAM90A23PA8MXZ1 464 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF814B7Z6K7 855 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 J3QRE1 110 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 E2F6O75461 281 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 AHSA1O95433 338 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 STAMBPO95630 424 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 FSTL3O95633 263 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 IFNA2P01563 188 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 UBTFL6P0CB48 400 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 RPS2P15880 293 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 GABRB1P18505 474 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 MAKP20794 623 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CXCR1P25024 350 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 PTAFRP25105 342 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CDH15P55291 814 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CARD18P57730 90 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SNRPGP62308 76 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 IL13RA1P78552 427 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 KEAP1Q14145 624 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 RFX4Q33E94 735 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZBED5Q49AG3 693 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SLC35D3Q5M8T2 416 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SLX4IPQ5VYV7 408 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 KRT80Q6KB66 452 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 VTCN1Q7Z7D3 282 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 MEX3DQ86XN8 651 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 RBM45Q8IUH3 476 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 BCL6BQ8N143 479 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 NOXO1Q8NFA2 376 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 DOK4Q8TEW6 326 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 MCUR1Q96AQ8 359 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CCDC120Q96HB5 630 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 WDFY2Q96P53 400 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 MNTQ99583 582 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.06□□□□□ -1.925e-7■■■■■ 29.2
CCDC66-202ENST00000341455 RLIMQ9NVW2 624 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ADA2Q9NZK5 511 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SLC23A1Q9UHI7 598 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 LAMP5Q9UJQ1 280 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 POFUT2Q9Y2G5 429 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 AMDHD2Q9Y303 409 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 TRBV4-1A0A0J9YWV2 114 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZC3H12DA2A288 527 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ACOD1A6NK06 481 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 NPIPA5E9PKD4 350 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 DLGAP1O14490 977 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CTDSP2O14595 271 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SMPD2O60906 423 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SLC43A1O75387 559 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 SYNGR4O95473 234 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 TGM6O95932 706 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ALPLP05186 524 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 NCK1P16333 377 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CCKARP32238 428 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 IFNA8P32881 189 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 MSX2P35548 267 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CPA2P48052 419 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CD83Q01151 205 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 CHRNB3Q05901 458 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 PUDPQ08623 228 aa3.06□□□□□ -1.92
CCDC66-202ENST00000341455 MRPL28Q13084 256 aaKnown RBP3.06□□□□□ -1.92
CCDC66-202ENST00000341455 ZSCAN26Q16670 478 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms