RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 CADM1Q9BY67 442 aaKnown RBP13.29□□□□□ -0.28
VAPA-201ENST00000340541 NDEL1Q9GZM8 345 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 OR52D1Q9H346 318 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 VSX1Q9NZR4 365 aaPredicted RBP13.29□□□□□ -0.28
VAPA-201ENST00000340541 IER3IP1Q9Y5U9 82 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 COL6A5A8TX70 2615 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 GSC2O15499 205 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 DNAJC8O75937 253 aaPredicted RBP13.28□□□□□ -0.28
VAPA-201ENST00000340541 PPP1R3DO95685 299 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 SCG5P05408 212 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 RAP2AP10114 183 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 APEHP13798 732 aaKnown RBP13.28□□□□□ -0.28
VAPA-201ENST00000340541 CTLA4P16410 223 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 IFNGR2P38484 337 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 SNTB2Q13425 540 aaKnown RBP13.28□□□□□ -0.28
VAPA-201ENST00000340541 DAG1Q14118 895 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 EFNB3Q15768 340 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 SGCAQ16586 387 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 TMEM53Q6P2H8 277 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 VHLLQ6RSH7 139 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 PAQR4Q8N4S7 273 aaPredicted RBP13.28□□□□□ -0.28
VAPA-201ENST00000340541 CPEB3Q8NE35 698 aaKnown RBP13.28□□□□□ -0.28
VAPA-201ENST00000340541 GNPDA2Q8TDQ7 276 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 CANT1Q8WVQ1 401 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 POMPQ9Y244 141 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 CHD3Q12873 2000 aaKnown RBP13.28□□□□□ -0.28
VAPA-201ENST00000340541 FBN3Q75N90 2809 aa13.28□□□□□ -0.28
VAPA-201ENST00000340541 ATRQ13535 2644 aa13.27□□□□□ -0.28
VAPA-201ENST00000340541 TMEM129A0AVI4 362 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 SOCS2O14508 198 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 XKRYO14609 159 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 ARPC3O15145 178 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 GPRIN2O60269 458 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 GASTP01350 101 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 ZNF32P17041 273 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 LAP3P28838 519 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 SLC6A6P31641 620 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 CDKN2AP42771 156 aaKnown RBP13.27□□□□□ -0.29
VAPA-201ENST00000340541 RPS6KA3P51812 740 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 ENDOGQ14249 297 aaKnown RBP13.27□□□□□ -0.29
VAPA-201ENST00000340541 KRT80Q6KB66 452 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 ADCK1Q86TW2 530 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 LINC00471Q8N535 108 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 SLC30A7Q8NEW0 376 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 SAMD8Q96LT4 415 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 ERMAPQ96PL5 475 aaPredicted RBP13.27□□□□□ -0.29
VAPA-201ENST00000340541 CHID1Q9BWS9 393 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 SYT4Q9H2B2 425 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 PLK3Q9H4B4 646 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 RNF121Q9H920 327 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 POLE4Q9NR33 117 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 SLC7A8Q9UHI5 535 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 SAMHD1Q9Y3Z3 626 aaKnown RBP13.27□□□□□ -0.29
VAPA-201ENST00000340541 U3KQV3 271 aa13.27□□□□□ -0.29
VAPA-201ENST00000340541 FBN1P35555 2871 aaKnown RBP13.27□□□□□ -0.29
VAPA-201ENST00000340541 A0A1W2PPL8 197 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 DHRS12A0PJE2 317 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 B9A039 149 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 CD5LO43866 347 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 CCNB2O95067 398 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 IFNA2P01563 188 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 CST2P09228 141 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 CCL2P13500 99 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 DSCR9P59020 149 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 PSG4Q00888 419 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 FLOT2Q14254 428 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 MICAQ29983 383 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 PABPC1L2AQ5JQF8 200 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 UGT2A3Q6UWM9 527 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 HIPK1Q86Z02 1210 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 DOK1Q99704 481 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 ZNF416Q9BWM5 594 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 NUAK2Q9H093 628 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 EGLN3Q9H6Z9 239 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 REEP1Q9H902 201 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 EMC7Q9NPA0 242 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 CDH10Q9Y6N8 788 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 DNHD1Q96M86 4753 aa13.26□□□□□ -0.29
VAPA-201ENST00000340541 TCRBV3S1A0A5B6 114 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 DCTN6O00399 190 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 SLC16A7O60669 478 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 STAMBPO95630 424 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 SNAP29O95721 258 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 IGFBP1P08833 259 aaPredicted RBP13.25□□□□□ -0.29
VAPA-201ENST00000340541 MSR1P21757 451 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 APEX1P27695 318 aaKnown RBP13.25□□□□□ -0.29
VAPA-201ENST00000340541 GLRXP35754 106 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 DBPQ10586 325 aaPredicted RBP13.25□□□□□ -0.29
VAPA-201ENST00000340541 TMEM179BQ7Z7N9 219 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 AQP11Q8NBQ7 271 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 OR8D4Q8NGM9 314 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 FOXN4Q96NZ1 517 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 RHNO1Q9BSD3 238 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 IFT27Q9BW83 186 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 PLA2G12AQ9BZM1 189 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 OR2H1Q9GZK4 316 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 WNT5BQ9H1J7 359 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 KCNN2Q9H2S1 579 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms