RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MRPL13Q9BYD1 178 aaKnown RBP11.86□□□□□ -0.51
USP47-202ENST00000339865 PADI1Q9ULC6 663 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 MADDQ8WXG6 1647 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 RGS11O94810 467 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ACOT7LQ6ZUV0 252 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 RETREG3Q86VR2 466 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 CLRN3Q8NCR9 226 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 TANKQ92844 425 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 GPR62Q9BZJ7 368 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 PTRH2Q9Y3E5 179 aaKnown RBP11.86□□□□□ -0.51
USP47-202ENST00000339865 DOCK6Q96HP0 2047 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 TRABD2BA6NFA1 517 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 CLDN24A6NM45 220 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ABHD16AO95870 558 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 FGF7P21781 194 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 FDX2Q6P4F2 183 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 FUBP1Q96AE4 644 aaKnown RBP11.86□□□□□ -0.51
USP47-202ENST00000339865 TMEM43Q9BTV4 400 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 EXOGQ9Y2C4 368 aaKnown RBP11.86□□□□□ -0.51
USP47-202ENST00000339865 H7C1C5 153 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 NDUFB7P17568 137 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 SLC6A11P48066 632 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 EXOSC7Q15024 291 aaKnown RBP11.85□□□□□ -0.51
USP47-202ENST00000339865 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
USP47-202ENST00000339865 SCGB1D4Q6XE38 83 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 MTMR14Q8NCE2 650 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 C8orf33Q9H7E9 229 aaPredicted RBP11.85□□□□□ -0.51
USP47-202ENST00000339865 VRTNQ9H8Y1 702 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 AKAP11Q9UKA4 1901 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 RRASP10301 218 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 TCTN2Q96GX1 697 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 C19orf43Q9BQ61 176 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 NARFLQ9H6Q4 476 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 B3GAT1Q9P2W7 334 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 FRMPD1Q5SYB0 1578 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 RAF1P04049 648 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 SCG5P05408 212 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ZNF85Q03923 595 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 LRRC26Q2I0M4 334 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 TMEM184AQ6ZMB5 413 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 GDF2Q9UK05 429 aaPredicted RBP11.85□□□□□ -0.51
USP47-202ENST00000339865 A0A1W2PPH5 198 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ADAM23O75077 832 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 GASTP01350 101 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 RNF224P0DH78 156 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 GALR1P47211 349 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 PCBP4P57723 403 aaKnown RBP11.85□□□□□ -0.51
USP47-202ENST00000339865 PAX5Q02548 391 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ERV3-1Q14264 604 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 IL22RA2Q969J5 263 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 NXPE3Q969Y0 559 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 SLC6A18Q96N87 628 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ELOVL1Q9BW60 279 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 BANF2Q9H503 90 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ST8SIA3O43173 380 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 CER1O95813 267 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 OR2T7P0C7T2 308 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 SPINT3P49223 89 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 FKBP1AP62942 108 aaKnown RBP11.85□□□□□ -0.51
USP47-202ENST00000339865 SIRPAP78324 504 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 LMAN2Q12907 356 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ANGPTL5Q86XS5 388 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 TP53INP2Q8IXH6 220 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 TCTEX1D1Q8N7M0 179 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 RAB22AQ9UL26 194 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 SCN5AQ14524 2016 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 TECPR2O15040 1411 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 TRBV4-1A0A0J9YWV2 114 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ZP2Q05996 745 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 GPR173Q9NS66 373 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 CLEC5AQ9NY25 188 aa11.85□□□□□ -0.51
USP47-202ENST00000339865 PPP1R11O60927 126 aaPredicted RBP11.84□□□□□ -0.51
USP47-202ENST00000339865 OPRD1P41143 372 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 GPM6AP51674 278 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 COL5A1-AS1Q5SY13 56 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 FRMPD2BQ6IN97 320 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 LIPIQ6XZB0 460 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 PRSS3P2Q8NHM4 247 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 FAM3DQ96BQ1 224 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 L3HYPDHQ96EM0 354 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 NMNAT3Q96T66 252 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 SLC2A11Q9BYW1 496 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 SLC25A32Q9H2D1 315 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 NOSIPQ9Y314 301 aaKnown RBP11.84□□□□□ -0.51
USP47-202ENST00000339865 TIMM9Q9Y5J7 89 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 UNCXA6NJT0 531 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 M0R2Z0 102 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 HCRTO43612 131 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 NEURL1O76050 574 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ATP6V1FQ16864 119 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ZNF547Q8IVP9 402 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 GNPNAT1Q96EK6 184 aaPredicted RBP11.84□□□□□ -0.51
USP47-202ENST00000339865 DNMT3BQ9UBC3 853 aaKnown RBP11.84□□□□□ -0.51
USP47-202ENST00000339865 COCHO43405 550 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 RNASE1P07998 156 aaKnown RBP11.84□□□□□ -0.51
USP47-202ENST00000339865 IAPPP10997 89 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms