RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 MAS1P04201 325 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 CD96P40200 585 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 RANBP1P43487 201 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 SUCLG1P53597 346 aaKnown RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 HSF2Q03933 536 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 HSD17B12Q53GQ0 312 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 RNASE12Q5GAN4 147 aaKnown RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 DMRTC1Q5HYR2 192 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 PHYHD1Q5SRE7 291 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 ASPHD2Q6ICH7 369 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 LRFN4Q6PJG9 635 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 C5orf46Q6UWT4 87 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 UTS2BQ765I0 119 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 FAM220AQ7Z4H9 259 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 SERPINA12Q8IW75 414 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 UEVLDQ8IX04 471 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 GTPBP8Q8N3Z3 284 aaPredicted RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 Q8N402 240 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 TRMT10AQ8TBZ6 339 aaKnown RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 C11orf40Q8WZ69 217 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 AP3S1Q92572 193 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF837Q96EG3 531 aaPredicted RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 OR8B4Q96RC9 309 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 SRXN1Q9BYN0 137 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 MMP28Q9H239 520 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 SEC61A2Q9H9S3 476 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 CENPMQ9NSP4 180 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 EXTL2Q9UBQ6 330 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 TRAPPC4Q9Y296 219 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 MRPS7Q9Y2R9 242 aaKnown RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 LRP12Q9Y561 859 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 N6AMT1Q9Y5N5 214 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 CCDC187A0A096LP49 1063 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 A0A1W2PQ72 361 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 LRRC3CA6NJW4 275 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 A6NL46 340 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 TFECO14948 347 aaPredicted RBP6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 SEC14L5O43304 696 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 TRAPPC6AO75865 159 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 HPP00738 406 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 HNRNPCP07910 306 aaKnown RBP eCLIP6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 CELA3AP09093 270 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 TACSTD2P09758 323 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 PGA4P0DJD7 388 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 PGA3P0DJD8 388 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 PTHLHP12272 177 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 CD53P19397 219 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 PTGS2P35354 604 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 CLDN15P56746 228 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 H3F3AP84243 136 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 WIPI1Q5MNZ9 446 aaPredicted RBP6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 XKRXQ6PP77 449 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 PRSS45Q7RTY3 260 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF679Q8IYX0 411 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF676Q8N7Q3 588 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 ST7LQ8TDW4 575 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 TMEM106AQ96A25 262 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 MIB2Q96AX9 1013 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 C11orf54Q9H0W9 315 aaPredicted RBP6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 KCNK15Q9H427 330 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 DKKL1Q9UK85 242 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 EMC9Q9Y3B6 208 aa6.59□□□□□ -1.36
SRFBP1-201ENST00000339397 A0A1W2PPL8 197 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 ISPDA4D126 451 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 RAB40ALP0C0E4 278 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF43P17038 809 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 CRABP1P29762 137 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 DAP3P51398 398 aaKnown RBP6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 DSCR4P56555 118 aaPredicted RBP6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 CLDN17P56750 224 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 B3GALT5-AS1P59052 145 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 PPP3R1P63098 170 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 EGR3Q06889 387 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 TCF15Q12870 199 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 SELENBP1Q13228 472 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 MFSD13AQ14CX5 517 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 TRAM1Q15629 374 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 SLC18B1Q6NT16 456 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 H3F3CQ6NXT2 135 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 STAC2Q6ZMT1 411 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 KRT77Q7Z794 578 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 ARMC10Q8N2F6 343 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 TEX19Q8NA77 164 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 IL17RDQ8NFM7 739 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 OR10S1Q8NGN2 331 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 C4orf45Q96LM5 186 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 ZPBPQ9BS86 351 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 SOX7Q9BT81 388 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 CCDC32Q9BV29 185 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 SMG1Q96Q15 3661 aaKnown RBP6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 NBEAQ8NFP9 2946 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 KMT2EQ8IZD2 1858 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 TRAV1-2A0A0B4J238 106 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 RER1O15258 196 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 FZD7O75084 574 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 CBR3O75828 277 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 NEURL1O76050 574 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 P04436 131 aa6.58□□□□□ -1.36
SRFBP1-201ENST00000339397 SERPINA7P05543 415 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms