RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LACC1Q8IV20 430 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 SECTM1Q8WVN6 248 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 CMTM3Q96MX0 182 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 PRSS56P0CW18 603 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 CALCBP10092 127 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 CD82P27701 267 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 TAS2R45P59539 299 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 ERV3-1Q14264 604 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 SFRP4Q6FHJ7 346 aaPredicted RBP11.26□□□□□ -0.61
FN1-202ENST00000336916 SLC35D2Q76EJ3 337 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 COX15Q7KZN9 410 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 OR1E3Q8WZA6 343 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 MRGPRX1Q96LB2 322 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 TRIB1Q96RU8 372 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 SHISA7A6NL88 538 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 PPP3CBP16298 524 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 HTR2BP41595 481 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 SLC35E1Q96K37 410 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 FAM183AA6NL82 134 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 IDSB3KWA1 339 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 CBR3O75828 277 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 GIFP27352 417 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 COPS3Q9UNS2 423 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 CT45A10P0DMU9 189 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 ACHEP22303 614 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 PNLIPRP2P54317 469 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 ZNF674Q2M3X9 581 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 ADAMTS7Q9UKP4 1686 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 RGRP47804 291 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 RBP2P50120 134 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 HTR6P50406 440 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 PFN3P60673 137 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 LSAMPQ13449 338 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 MDGA2Q7Z553 956 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 CPEB2Q7Z5Q1 589 aaKnown RBP11.26□□□□□ -0.61
FN1-202ENST00000336916 OR4F15Q8NGB8 312 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 TAAR9Q96RI9 348 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 NOX4Q9NPH5 578 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 A0A1B0GWA3 101 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 TRDV1A0A1B0GX56 115 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 SPDEFO95238 335 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 CRYBA1P05813 215 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 TNFRSF1AP19438 455 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 HLA-DMAP28067 261 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 PPICP45877 212 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 FAM199XQ6PEV8 388 aaPredicted RBP11.26□□□□□ -0.61
FN1-202ENST00000336916 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
FN1-202ENST00000336916 PPIL3Q9H2H8 161 aaKnown RBP11.26□□□□□ -0.61
FN1-202ENST00000336916 RIF1Q5UIP0 2472 aaKnown RBP11.26□□□□□ -0.61
FN1-202ENST00000336916 CD1CP29017 333 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 DHRS4L2Q6PKH6 230 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 TMEM200AQ86VY9 491 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 FAM185AQ8N0U4 392 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ZNF845Q96IR2 970 aaPredicted RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 OXGR1Q96P68 337 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 BCO1Q9HAY6 547 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ARPC4-TTLL3A0A0A6YYG9 625 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 H3BMQ9 156 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 BOLA2-SMG1P6H3BVE0 249 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 SDHAP31040 664 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 SRP9P49458 86 aaKnown RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 FOXA1P55317 472 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 TMEM207Q6UWW9 146 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ZNF784Q8NCA9 323 aaPredicted RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 OR13H1Q8NG92 308 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 GPBAR1Q8TDU6 330 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 DPCDQ9BVM2 203 aaPredicted RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 ESRP2Q9H6T0 727 aaKnown RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 FN3KRPQ9HA64 309 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 C19orf53Q9UNZ5 99 aaPredicted RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 PRSS21Q9Y6M0 314 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 TRAV17A0A0B4J275 112 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 TRBV4-1A0A0J9YWV2 114 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 HOXC4P09017 264 aaPredicted RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 CHRNB1P11230 501 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 PSMB5P28074 263 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 DUSP1P28562 367 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 ELP2Q6IA86 826 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 PARM1Q6UWI2 310 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 FCRLAQ7L513 359 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 PLPP5Q8NEB5 264 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 SLC25A18Q9H1K4 315 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 SULT1C4O75897 302 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 HOXD12P35452 270 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 BPIFB3P59826 476 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 PPP1CAP62136 330 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 PIWIL3Q7Z3Z3 882 aaKnown RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 CD163Q86VB7 1156 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ARFGAP1Q8N6T3 406 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ZNF75AQ96N20 296 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ATP23Q9Y6H3 246 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 NPPBP16860 134 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ZXDBP98169 803 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 ZNF740Q8NDX6 193 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 OR1N1Q8NGS0 311 aa11.25□□□□□ -0.61
FN1-202ENST00000336916 MRPL15Q9P015 296 aaKnown RBP11.25□□□□□ -0.61
FN1-202ENST00000336916 ARPC1BO15143 372 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms