RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 GNPNAT1Q96EK6 184 aaPredicted RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 GLIPR2Q9H4G4 154 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 ZNF629Q9UEG4 869 aaPredicted RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 SERTM2A0A1B0GWG4 89 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 OR2F2O95006 317 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 OR2F1Q13607 317 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 KDM4DQ6B0I6 523 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 ABHD17CQ6PCB6 329 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 RTL8AQ9BWD3 113 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 ASH2LQ9UBL3 628 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 STRAPQ9Y3F4 350 aaKnown RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 LTN1O94822 1766 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 A0A1B0GTW7 788 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 G3V3Q6 166 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 ALX3O95076 343 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 F2RP25116 425 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 C1orf140Q5VVS0 124 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 CAMKMTQ7Z624 323 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 OR2AE1Q8NHA4 323 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 ERVMER34-1Q9H9K5 563 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 B3GALT5Q9Y2C3 310 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 CDC14CA4D256 554 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 OR2A25A4D2G3 310 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 DUSP1P28562 367 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 SLC6A11P48066 632 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 TPPP2P59282 170 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 FCN2Q15485 313 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 PLAC9Q5JTB6 97 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 Q6ZRG5 221 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 OR2G3Q8NGZ4 309 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 AKR7LQ8NHP1 331 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 C11orf54Q9H0W9 315 aaPredicted RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 OPA3Q9H6K4 179 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 MRPS2Q9Y399 296 aaKnown RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 SNX11Q9Y5W9 270 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 CD1EP15812 388 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 GABRA4P48169 554 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 DHRS11Q6UWP2 260 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 OR13C8Q8NGS7 320 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 GOT1L1Q8NHS2 421 aaPredicted RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 STT3BQ8TCJ2 826 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 C1QTNF3Q9BXJ4 246 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 OR51I2Q9H344 312 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 MED20Q9H944 212 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 RAB18Q9NP72 206 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 LYRM2Q9NU23 88 aaPredicted RBP12.03□□□□□ -0.48
HLCS-201ENST00000336648 SLAMF8Q9P0V8 285 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 RAB13P51153 203 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 RPL27P61353 136 aaKnown RBP12.02□□□□□ -0.48
HLCS-201ENST00000336648 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 SYT13Q7L8C5 426 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 TMEM217Q8N7C4 229 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 RPL3LQ92901 407 aaKnown RBP12.02□□□□□ -0.48
HLCS-201ENST00000336648 FOXN4Q96NZ1 517 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 FBXO8Q9NRD0 319 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 CRYM-AS1A6NIL9 109 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 UMAD1C9J7I0 102 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 TRIM77I1YAP6 450 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 LGALS8O00214 317 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 RD3LP0DJH9 198 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 TACR1P25103 407 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 NHSL2Q5HYW2 709 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 OR5M10Q6IEU7 315 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 GLIPR1L1Q6UWM5 242 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 SFT2D1Q8WV19 159 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 DCLRE1CQ96SD1 692 aaKnown RBP12.02□□□□□ -0.48
HLCS-201ENST00000336648 ARHGDIGQ99819 225 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 UBQLN3Q9H347 655 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 ATP13A2Q9NQ11 1180 aa12.02□□□□□ -0.48
HLCS-201ENST00000336648 TARM1B6A8C7 271 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 CT45A10P0DMU9 189 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 TOR2AQ5JU69 321 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 GLYATL3Q5SZD4 288 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 CORO6Q6QEF8 472 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 Q6ZSR9 355 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 MAML2Q8IZL2 1156 aaPredicted RBP12.02□□□□□ -0.49
HLCS-201ENST00000336648 ARRDC3Q96B67 414 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 THAP10Q9P2Z0 257 aaPredicted RBP12.02□□□□□ -0.49
HLCS-201ENST00000336648 APEX1P27695 318 aaKnown RBP12.02□□□□□ -0.49
HLCS-201ENST00000336648 CSN1S1P47710 185 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 SLC35A2P78381 396 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 SPRED3Q2MJR0 410 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 PELI3Q8N2H9 469 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 NANOGP1Q8N7R0 232 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 EDAQ92838 391 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 SLC35E1Q96K37 410 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 CSF3RQ99062 836 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 VAMP8Q9BV40 100 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 PARD6AQ9NPB6 346 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 ZNF355PQ9NSJ1 428 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 LOC102724200A0A096LPH7 203 aaPredicted RBP12.02□□□□□ -0.49
HLCS-201ENST00000336648 ZNF724A8MTY0 619 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 JTBO76095 146 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 RFC3P40938 356 aa12.02□□□□□ -0.49
HLCS-201ENST00000336648 ENDOGQ14249 297 aaKnown RBP12.02□□□□□ -0.49
HLCS-201ENST00000336648 FAM26DQ5JW98 314 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms