RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 UCN2Q96RP3 112 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 CPNE5Q9HCH3 593 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 UGT2A1Q9Y4X1 527 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 CPAMD8Q8IZJ3 1885 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 IDH3BO43837 385 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 STARP49675 285 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 OC90Q02509 493 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 ZFP36L1Q07352 338 aaKnown RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 SLC35D3Q5M8T2 416 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 TMEM225Q6GV28 225 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 SYS1Q8N2H4 156 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 MS4A15Q8N5U1 240 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 CYYR1Q96J86 154 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 FYTTD1Q96QD9 318 aaKnown RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 LIN7BQ9HAP6 207 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 C19orf25Q9UFG5 118 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 TEKT2Q9UIF3 430 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 DSPP15924 2871 aaKnown RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 IGLV1-36A0A0B4J1U3 117 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 MEIOCA2RUB1 952 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 YKT6O15498 198 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 DXOO77932 396 aaKnown RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 ABHD16AO95870 558 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 JMJD7P0C870 316 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 M6PRP20645 277 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 SLC23A3Q6PIS1 610 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 H1FNTQ75WM6 255 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 RAB43Q86YS6 212 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 GLB1L2Q8IW92 636 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 OTOSQ8NHW6 89 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 CMKLR1Q99788 373 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 THAP7Q9BT49 309 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 TCF7L1Q9HCS4 588 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 FOXJ2Q9P0K8 574 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 TRAPPC4Q9Y296 219 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 CHCHD2Q9Y6H1 151 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 A0A1W2PNU3 283 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 HOXA6P31267 233 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 MAP2K3P46734 347 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 CCR6P51684 374 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 PRKXP51817 358 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 SLC25A1P53007 311 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 TAGLNQ01995 201 aaKnown RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF684Q5T5D7 378 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 OR10K2Q6IF99 312 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 NDUFAF7Q7L592 441 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 RAB11FIP2Q7L804 512 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 LINGO2Q7L985 606 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 CMTM4Q8IZR5 234 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 OR2M3Q8NG83 312 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 SOX7Q9BT81 388 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 NARFLQ9H6Q4 476 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 EVA1AQ9H8M9 152 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 SERINC1Q9NRX5 453 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 CGGBP1Q9UFW8 167 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-201ENST00000336180 EDARQ9UNE0 448 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 POLR1DQ9Y2S0 133 aa11.26□□□□□ -0.61
LIMK1-201ENST00000336180 LYRM1O43325 122 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 MT-ND4P03905 459 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 S100A6P06703 90 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 FOLR3P41439 243 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 Q0VFX4 171 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 CDC20Q12834 499 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 GPR50Q13585 617 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 GPR139Q6DWJ6 353 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 GDPD1Q8N9F7 314 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 BEST4Q8NFU0 473 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 LIPHQ8WWY8 451 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 UPRTQ96BW1 309 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 SLC22A4Q9H015 551 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 LRP12Q9Y561 859 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 MGAQ8IWI9 3026 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 MED13Q9UHV7 2174 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 UCHL1P09936 223 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 CHAF1BQ13112 559 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 IL11RAQ14626 422 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 ATP1A1-AS1Q5TC04 95 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 RPS19BP1Q86WX3 136 aaKnown RBP11.25□□□□□ -0.61
LIMK1-201ENST00000336180 OR51A2Q8NGJ7 313 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 ANGPTL6Q8NI99 470 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 SPACA5Q96QH8 159 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 ZMAT3Q9HA38 289 aaKnown RBP11.25□□□□□ -0.61
LIMK1-201ENST00000336180 CHST11Q9NPF2 352 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 STMN3Q9NZ72 180 aa11.25□□□□□ -0.61
LIMK1-201ENST00000336180 DCDC2BA2VCK2 349 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 LIPT2A6NK58 231 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 PCNX2A6NKB5 2137 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 OR4C45A6NMZ5 311 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 ARL6IP5O75915 188 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 TXNDC12O95881 172 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 EFNB2P52799 333 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 TBRG1Q3YBR2 411 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 STAC2Q6ZMT1 411 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 ELP5Q8TE02 316 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 CT55Q8WUE5 264 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 CHAC2Q8WUX2 184 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SLC7A6Q92536 515 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 DDIT4LQ96D03 193 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms