RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 AJAP1Q9UKB5 411 aaPredicted RBP5.71□□□□□ -1.49
CSMD1-201ENST00000335551 LAMP3Q9UQV4 416 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 SORBS2O94875 1100 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 TNFRSF1BP20333 461 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 SLC36A2Q495M3 483 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 NXNL2Q5VZ03 156 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 OR7E24Q6IFN5 339 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 PRR27Q6MZM9 219 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM151BQ8IW70 566 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 KLHDC7BQ96G42 594 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 GPR34Q9UPC5 381 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 NBASA2RRP1 2371 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ABHD16AO95870 558 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 CHRM4P08173 479 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 CD37P11049 281 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 GALR1P47211 349 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 BTNL3Q6UXE8 466 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF66Q6ZN08 573 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 THAP3Q8WTV1 239 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 WDR92Q96MX6 357 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ACPTQ9BZG2 426 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 WDR61Q9GZS3 305 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 HELTA6NFD8 242 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 RAB27BO00194 218 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF888P0CJ79 500 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 RPL17P18621 184 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 THEM4Q5T1C6 240 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 CBLL1Q75N03 491 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 OVCH1Q7RTY7 1134 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 NAA50Q9GZZ1 169 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 GLTPD2A6NH11 291 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ATXN1LP0C7T5 689 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 DUSP3P51452 185 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 DCAF7P61962 342 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 GPR17Q13304 367 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 SEH1LQ96EE3 360 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 DLL4Q9NR61 685 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 BOLA1Q9Y3E2 137 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 NAV3Q8IVL0 2385 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 TRBV4-1A0A0J9YWV2 114 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ACOD1A6NK06 481 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 FAM183AA6NL82 134 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 GSTP1P09211 210 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 RPL12P30050 165 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 FRMPD2BQ6IN97 320 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ETV3LQ6ZN32 361 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 LIPHQ8WWY8 451 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF516Q92618 1163 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 DNAJA3Q96EY1 480 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 SORBS1Q9BX66 1292 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 GNB4Q9HAV0 340 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 FOCADQ5VW36 1801 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 A0A0D9SEW6 157 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 RPL29P47914 159 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 WNT7BP56706 349 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 CLLU1Q5K131 121 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 PNPLA1Q8N8W4 532 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 ASB11Q8WXH4 323 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 SLC39A7Q92504 469 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 FZD8Q9H461 694 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 TAS2R5Q9NYW4 299 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 GPR55Q9Y2T6 319 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 SNX11Q9Y5W9 270 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 OPN1MWP04001 364 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 OPN1MW2P0DN77 364 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 OPN1MW3P0DN78 364 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 MMP11P24347 488 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 OR7A5Q15622 319 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 SLC39A11Q8N1S5 342 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 RPL3LQ92901 407 aaKnown RBP5.71□□□□□ -1.5
CSMD1-201ENST00000335551 TP53RKQ96S44 253 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 STACQ99469 402 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 FAM198AQ9UFP1 575 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 MAST2Q6P0Q8 1798 aa5.71□□□□□ -1.5
CSMD1-201ENST00000335551 LRRC30A6NM36 301 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 FAM227AF5H4B4 570 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PRAMEF4O60810 478 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PIPP12273 146 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 FCGR2AP12318 317 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 G6PCP35575 357 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PSMB2P49721 201 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 GPR174Q9BXC1 333 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 GSTO2Q9H4Y5 243 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR5V1Q9UGF6 321 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RARRES3Q9UL19 164 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PHF3Q92576 2039 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 NKX6-3A6NJ46 265 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 AP4M1O00189 453 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 HOXC11O43248 304 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 AQP8O94778 261 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 CPEP16870 476 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF25P17030 456 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 FCGR2CP31995 323 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 IDUAP35475 653 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SLC6A11P48066 632 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ZXDBP98169 803 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR2G6Q5TZ20 316 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 KDM4DQ6B0I6 523 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PLXDC1Q8IUK5 500 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms