RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 HIKESHIQ53FT3 197 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 KLHL12Q53G59 568 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 SLC35D3Q5M8T2 416 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 FAM27BQ5VT28 67 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 MEPCEQ7L2J0 689 aaKnown RBP15.32■□□□□ 0.04
CHGA-202ENST00000334654 SKA3Q8IX90 412 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 C8orf59Q8N0T1 100 aaPredicted RBP15.32■□□□□ 0.04
CHGA-202ENST00000334654 SETD9Q8NE22 299 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 FGFBP3Q8TAT2 258 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 C11orf40Q8WZ69 217 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 SH3GL3Q99963 347 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 SEC61A2Q9H9S3 476 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 SIAEQ9HAT2 523 aa15.32■□□□□ 0.04
CHGA-202ENST00000334654 UTP20O75691 2785 aaKnown RBP15.31■□□□□ 0.04
CHGA-202ENST00000334654 ANKHD1Q8IWZ3 2542 aaKnown RBP15.31■□□□□ 0.04
CHGA-202ENST00000334654 USP9YO00507 2555 aaPredicted RBP15.31■□□□□ 0.04
CHGA-202ENST00000334654 TVP23AA6NH52 213 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 PSKH1P11801 424 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 NPR2P20594 1047 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 GLO1Q04760 184 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 ENDOGQ14249 297 aaKnown RBP15.31■□□□□ 0.04
CHGA-202ENST00000334654 SGCAQ16586 387 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 OR7E24Q6IFN5 339 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 THAP5Q7Z6K1 395 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 CNIH3Q8TBE1 160 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 S100PBPQ96BU1 408 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 ZMYND19Q96E35 227 aaPredicted RBP15.31■□□□□ 0.04
CHGA-202ENST00000334654 OR10A4Q9H209 315 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 EMC7Q9NPA0 242 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 SLC17A5Q9NRA2 495 aa15.31■□□□□ 0.04
CHGA-202ENST00000334654 OR5H1A6NKK0 313 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 C19orf84I3L1E1 186 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 DENRO43583 198 aaKnown RBP15.3■□□□□ 0.04
CHGA-202ENST00000334654 HRGP04196 525 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 OR8G3PP0DMU2 310 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 MSR1P21757 451 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 GSTT1P30711 240 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 FMO3P31513 532 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 CENPAP49450 140 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 TEKQ02763 1124 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 CDK5R2Q13319 367 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 SMN1Q16637 294 aaKnown RBP15.3■□□□□ 0.04
CHGA-202ENST00000334654 MEDAGQ5VYS4 303 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 TIGD4Q8IY51 512 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 C17orf78Q8N4C9 275 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 STEAP2Q8NFT2 490 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 OR6K6Q8NGW6 343 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 ZNF416Q9BWM5 594 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 WDR76Q9H967 626 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 B3GNT2Q9NY97 397 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 PCDHGB5Q9Y5G0 923 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 COMMD3-BMI1R4GMX3 469 aa15.3■□□□□ 0.04
CHGA-202ENST00000334654 ICE1Q9Y2F5 2266 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 ARPC4-TTLL3A0A0A6YYG9 625 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 PATE4P0C8F1 98 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 HOXB1P14653 301 aaPredicted RBP15.29■□□□□ 0.04
CHGA-202ENST00000334654 IL32P24001 234 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 HTR1FP30939 366 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 CDH11P55287 796 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 LSM6P62312 80 aaKnown RBP15.29■□□□□ 0.04
CHGA-202ENST00000334654 SORDQ00796 357 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 SNTB1Q13884 538 aaKnown RBP15.29■□□□□ 0.04
CHGA-202ENST00000334654 PCK2Q16822 640 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 GID4Q8IVV7 300 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 LRRC18Q8N456 261 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 FBXO17Q96EF6 278 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 ACTR6Q9GZN1 396 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 NOX3Q9HBY0 568 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 HAO2Q9NYQ3 351 aa15.29■□□□□ 0.04
CHGA-202ENST00000334654 H2AFY2Q9P0M6 372 aaPredicted RBP15.29■□□□□ 0.04
CHGA-202ENST00000334654 A0A1W2PR80 420 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 SH3D21A4FU49 640 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 SLC22A31A6NKX4 558 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 THBDP07204 575 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 CST2P09228 141 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 MMP7P09237 267 aaPredicted RBP15.28■□□□□ 0.04
CHGA-202ENST00000334654 IGFBP2P18065 325 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 RPS27P42677 84 aaKnown RBP15.28■□□□□ 0.04
CHGA-202ENST00000334654 BLVRAP53004 296 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 GGTLC2Q14390 218 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 TIMM23BQ5SRD1 257 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 SEZ6L2Q6UXD5 910 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 ACBD4Q8NC06 268 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 ZNF75AQ96N20 296 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 WFIKKN1Q96NZ8 548 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 CLN6Q9NWW5 311 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 WARS2Q9UGM6 360 aaKnown RBP15.28■□□□□ 0.04
CHGA-202ENST00000334654 SLC25A15Q9Y619 301 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 LHFPL6Q9Y693 200 aa15.28■□□□□ 0.04
CHGA-202ENST00000334654 CLDN1O95832 211 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 HLA-HP01893 362 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 HLA-DQA2P01906 255 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 GUCA1AP43080 201 aaPredicted RBP15.27■□□□□ 0.04
CHGA-202ENST00000334654 NUDT6P53370 316 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 RPS7P62081 194 aaKnown RBP15.27■□□□□ 0.04
CHGA-202ENST00000334654 TUBA1BP68363 451 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 TUBA4AP68366 448 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 MED21Q13503 144 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 TAB1Q15750 504 aa15.27■□□□□ 0.04
CHGA-202ENST00000334654 TEX30Q5JUR7 227 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms