RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 OR10H5Q8NGA6 315 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 SMAP2Q8WU79 429 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 NABP1Q96AH0 204 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TBX5Q99593 518 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 MND1Q9BWT6 205 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 RBM24Q9BX46 236 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 NELFAQ9H3P2 528 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 SEC61A2Q9H9S3 476 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TINAGQ9UJW2 476 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 COPS3Q9UNS2 423 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 LSM2Q9Y333 95 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF593O00488 134 aaPredicted RBP9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 TNFSF13O75888 250 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 IL2RAP01589 272 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 IGHV3-9P01782 118 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 SCG5P05408 212 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 TFAP2AP05549 437 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 SPARCP09486 303 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 PSKH1P11801 424 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF823P16415 610 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 MSR1P21757 451 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF85Q03923 595 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 FOXF2Q12947 444 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 GALEQ14376 348 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 NEDD8Q15843 81 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 UBE2UQ5VVX9 321 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 FBXW9Q5XUX1 488 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 C3P1Q6ZMU1 363 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF367Q7RTV3 350 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 KLHL36Q8N4N3 616 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 RFLNBQ8N5W9 214 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 NANOGP1Q8N7R0 232 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF454Q8N9F8 522 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 OTOSQ8NHW6 89 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 MUL1Q969V5 352 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF837Q96EG3 531 aaPredicted RBP9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 ALG8Q9BVK2 526 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 TMEM38BQ9NVV0 291 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 UPB1Q9UBR1 384 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 PRSS50Q9UI38 385 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 KLHDC2Q9Y2U9 406 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 TMEM14AQ9Y6G1 99 aa9.02□□□□□ -0.96
VIPAS39-201ENST00000327028 FREM1Q5H8C1 2179 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 PHYHO14832 338 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 NPR2P20594 1047 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 GUCA1AP43080 201 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 RPL5P46777 297 aaKnown RBP9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 ALDH3B2P48448 385 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 HCCSP53701 268 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 NRN1LQ496H8 165 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 OTPQ5XKR4 325 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 VWA1Q6PCB0 445 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 DPY19L4Q7Z388 723 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 LHFPL3Q86UP9 236 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 UBE2J2Q8N2K1 259 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 OR52N1Q8NH53 320 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 MRPL48Q96GC5 212 aaKnown RBP9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 MYCBPQ99417 103 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 FOXB1Q99853 325 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 EMC7Q9NPA0 242 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 LAMP5Q9UJQ1 280 aa9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 CAB39Q9Y376 341 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF99A8MXY4 864 aaPredicted RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CNOT4O95628 575 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ALOX5APP20292 161 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CASP6P55212 293 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 LSM6P62312 80 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ACTA2P62736 377 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ACTG2P63267 376 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SGCAQ16586 387 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SLC18B1Q6NT16 456 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SSX6Q7RTT6 188 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 NAXEQ8NCW5 288 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 RORBQ92753 470 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SFXN3Q9BWM7 321 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CACNA1BQ00975 2339 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 TMCC2O75069 709 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 LCKP06239 509 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 RPS27P42677 84 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SH3BGRP55822 239 aaPredicted RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 WNT4P56705 351 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 FAPQ12884 760 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CDONQ4KMG0 1287 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 TMPRSS11AQ6ZMR5 421 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF627Q7L945 461 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 BTLAQ7Z6A9 289 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ATCAYQ86WG3 371 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF485Q8NCK3 441 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ASB17Q8WXJ9 295 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 STARD4Q96DR4 205 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SIAEQ9HAT2 523 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 PLSCR4Q9NRQ2 329 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CYB5R1Q9UHQ9 305 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 PROCRQ9UNN8 238 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 LHFPL6Q9Y693 200 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 INTS1Q8N201 2190 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 E9PLN8 166 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms