RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TMEM35AQ53FP2 167 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 EOGTQ5NDL2 527 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 CYB5R2Q6BCY4 276 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ASTLQ6HA08 431 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SUMF1Q8NBK3 374 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 CAMKVQ8NCB2 501 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 OR5H2Q8NGV7 314 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 LURAP1Q96LR2 239 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 KLHL15Q96M94 604 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SDF2Q99470 211 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SLC25A32Q9H2D1 315 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 BANF2Q9H503 90 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 KCND3Q9UK17 655 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 PRAMEF27A3QJZ7 478 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 MFSD2BA6NFX1 497 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 B4DGG1 531 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 GPRIN2O60269 458 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 LRP3O75074 770 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ABLIM3O94929 683 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 VSIG10L2P0DP72 767 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 MECP2P51608 486 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 VAMP2P63027 116 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 PLA2G7Q13093 441 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 KLF9Q13886 244 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SERTAD2Q14140 314 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF660Q6AZW8 331 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 RGS7BPQ6MZT1 257 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ABHD17CQ6PCB6 329 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 KCTD18Q6PI47 426 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 Q6ZRG5 221 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ACOT7LQ6ZUV0 252 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF550Q7Z398 422 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 CPEB2Q7Z5Q1 589 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 MARCH1Q8TCQ1 289 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 RXFP4Q8TDU9 374 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 FGF14Q92915 247 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SMARCD2Q92925 531 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 MRPS24Q96EL2 167 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 MMABQ96EY8 250 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SPSB2Q99619 263 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 RHOFQ9HBH0 211 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 INPP5EQ9NRR6 644 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 GFOD1Q9NXC2 390 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 EMC9Q9Y3B6 208 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 COL4A6Q14031 1691 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 REV3LO60673 3130 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 UNC13CQ8NB66 2214 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 P2RY10O00398 339 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 SERPINA2P20848 420 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 HTR2CP28335 458 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 ALDH3B1P43353 468 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 EMP2P54851 167 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 H2BFSP57053 126 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 MAT1AQ00266 395 aaKnown RBP6.86□□□□□ -1.31
CDHR3-201ENST00000317716 DUSP2Q05923 314 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF626Q68DY1 528 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 SLC48A1Q6P1K1 146 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF704Q6ZNC4 412 aaPredicted RBP6.86□□□□□ -1.31
CDHR3-201ENST00000317716 NUP54Q7Z3B4 507 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 BAP18Q8IXM2 172 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 GOT1L1Q8NHS2 421 aaPredicted RBP6.86□□□□□ -1.31
CDHR3-201ENST00000317716 OVCA2Q8WZ82 227 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 ADOQ96SZ5 270 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 CDC6Q99741 560 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 NUDT22Q9BRQ3 303 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 OR52A5Q9H2C5 316 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 PELI2Q9HAT8 420 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 C2orf42Q9NWW7 574 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 TAS2R4Q9NYW5 299 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 GHRLQ9UBU3 117 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 MTCH2Q9Y6C9 303 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 WDFY4Q6ZS81 3184 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 TMEM218A2RU14 115 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF850A8MQ14 1090 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 NPIPA5E9PKD4 350 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 DPM1O60762 260 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 KAT7O95251 611 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 SLC34A2O95436 690 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 NSA2O95478 260 aaKnown RBP6.86□□□□□ -1.31
CDHR3-201ENST00000317716 APBB3O95704 486 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 PMS2P2O95744 297 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 EFNB2P52799 333 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF85Q03923 595 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 DHRS2Q13268 280 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 EIF4EBP2Q13542 120 aaPredicted RBP6.86□□□□□ -1.31
CDHR3-201ENST00000317716 MRPL58Q14197 206 aaKnown RBP6.86□□□□□ -1.31
CDHR3-201ENST00000317716 CORO6Q6QEF8 472 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 GVQW1Q8N7I0 195 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 CDRT4Q8N9R6 151 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 SUMF2Q8NBJ7 301 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 OR4N2Q8NGD1 307 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 HPSE2Q8WWQ2 592 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 SLC25A28Q96A46 364 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 ARRDC3Q96B67 414 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 CRLF2Q9HC73 371 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 STEAP1Q9UHE8 339 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 NPIPA1Q9UND3 350 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 FOXJ3Q9UPW0 622 aa6.86□□□□□ -1.31
CDHR3-201ENST00000317716 MOKQ9UQ07 419 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms