RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF593O00488 134 aaPredicted RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 DOK2O60496 412 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 TUSC2O75896 110 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 PIAS2O75928 621 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 F13BP05160 661 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SNCAP37840 140 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 HOXA1P49639 335 aaPredicted RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 C21orf62-AS1Q17RA5 79 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 TCTN1Q2MV58 587 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 TMED6Q8WW62 240 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 PIGCQ92535 297 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 TMEM106AQ96A25 262 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SLC25A21Q9BQT8 299 aaPredicted RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 TMEM43Q9BTV4 400 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 TREX1Q9NSU2 369 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ACSS1Q9NUB1 689 aaPredicted RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 TRAF3IP2O43734 574 aaPredicted RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 H2AFB1P0C5Y9 115 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 DPP4P27487 766 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 HTR1FP30939 366 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 APLNRP35414 380 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 RAD52P43351 418 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 LPCAT3Q6P1A2 487 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 OPN5Q6U736 354 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 LCTLQ6UWM7 567 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ETFBKMTQ8IXQ9 262 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 APH1BQ8WW43 257 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 ATOH8Q96SQ7 321 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 MACROD1Q9BQ69 325 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ZNF251Q9BRH9 671 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 UTP23Q9BRU9 249 aaKnown RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 LMF2Q9BU23 707 aaKnown RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 CHRNA9Q9UGM1 479 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ACAD8Q9UKU7 415 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SLC35A3Q9Y2D2 325 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 MRPS28Q9Y2Q9 187 aaKnown RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 F5P12259 2224 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SPTY2D1-AS1A0A0U1RR47 76 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TRAPPC2LH3BP13 241 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 NAGAP17050 411 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SRMP19623 302 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 RAB1AP62820 205 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 DPTQ07507 201 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CAMK2BQ13554 666 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 MKXQ8IYA7 352 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 OR52R1Q8NGF1 315 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 GPBAR1Q8TDU6 330 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TMEM18Q96B42 140 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 NKX3-1Q99801 234 aaPredicted RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 CRLF2Q9HC73 371 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 LAMA4Q16363 1823 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 GJE1A6NN92 205 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 H7BYZ3 331 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 LDB3O75112 727 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 BLVRBP30043 206 aaPredicted RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 CALCRP30988 508 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PTGER4P35408 488 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TGFBR1P36897 503 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PRLHRP49683 370 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 NXPH1P58417 271 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SRPXP78539 464 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 DEFB110Q30KQ9 67 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 OR2T2Q6IF00 324 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ESPNLQ6ZVH7 1005 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SLC35D2Q76EJ3 337 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 GLCCI1Q86VQ1 547 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 GCNT2Q8N0V5 402 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ACOT4Q8N9L9 421 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 OR52E1Q8NGJ3 308 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PSMF1Q92530 271 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SELENOIQ9C0D9 397 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TMPRSS5Q9H3S3 457 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ZNF331Q9NQX6 463 aaPredicted RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 MED9Q9NWA0 146 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 AK3Q9UIJ7 227 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 COL4A1P02462 1669 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 LOC100289279A0A1B0GTE1 492 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SYT5O00445 386 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SPNP16150 400 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PRPH2P23942 346 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 FCER1GP30273 86 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 HTR3AP46098 478 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 P2RX1P51575 399 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ELLP55199 621 aaPredicted RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 PDE7AQ13946 482 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 EXOSC7Q15024 291 aaKnown RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 SOWAHCQ53LP3 525 aaPredicted RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 SAXO2Q658L1 398 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TMEM71Q6P5X7 295 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 RHOUQ7L0Q8 258 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PIANPQ8IYJ0 282 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 NANOGP1Q8N7R0 232 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ZNF610Q8N9Z0 462 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 OR9K2Q8NGE7 335 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TANKQ92844 425 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ZCCHC4Q9H5U6 513 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SLC35D1Q9NTN3 355 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms