RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 GTF2F2P13984 249 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 SEC61A1P61619 476 aaKnown RBP13.63□□□□□ -0.23
CSDC2-201ENST00000306149 SLC17A1Q14916 467 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 HLA-DQA1Q5Y7H0 255 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 OR51S1Q8NGJ8 323 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 MNTQ99583 582 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 PTDSS2Q9BVG9 487 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 CHST6Q9GZX3 395 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 PPA2Q9H2U2 334 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 TAS2R8Q9NYW2 309 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 OPN4Q9UHM6 478 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 KCNMB2Q9Y691 235 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 TMEM14AQ9Y6G1 99 aa13.63□□□□□ -0.23
CSDC2-201ENST00000306149 PRSS37A4D1T9 235 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 HSPB2A8KAH6 182 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 HLA-DOBP13765 273 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 IL11P20809 199 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 S100A11P31949 105 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 ADAM8P78325 824 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 PLCXD2Q0VAA5 305 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 EBPQ15125 230 aaKnown RBP13.62□□□□□ -0.23
CSDC2-201ENST00000306149 HSPB2Q16082 182 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 ANKRD16Q6P6B7 361 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 TMEM205Q6UW68 189 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 FAM3DQ96BQ1 224 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 OR8B4Q96RC9 309 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 NPAS1Q99742 590 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 PELOQ9BRX2 385 aaKnown RBP13.62□□□□□ -0.23
CSDC2-201ENST00000306149 ZMAT3Q9HA38 289 aaKnown RBP13.62□□□□□ -0.23
CSDC2-201ENST00000306149 WDFY3Q8IZQ1 3526 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 TRAV36DV7A0A075B6V5 113 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 RP2O75695 350 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 CD3DP04234 171 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 H2BFSP57053 126 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 OR1D5P58170 312 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 RASGEF1BQ0VAM2 473 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 HLXQ14774 488 aaPredicted RBP13.62□□□□□ -0.23
CSDC2-201ENST00000306149 RGS7BPQ6MZT1 257 aaPredicted RBP13.62□□□□□ -0.23
CSDC2-201ENST00000306149 NDUFAF7Q7L592 441 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 ATG5Q9H1Y0 275 aa13.62□□□□□ -0.23
CSDC2-201ENST00000306149 CGGBP1Q9UFW8 167 aaPredicted RBP13.62□□□□□ -0.23
CSDC2-201ENST00000306149 IGHV3-20A0A0C4DH32 117 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 IGLV3-19P01714 112 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 GP1BBP13224 206 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 NME1P15531 152 aaKnown RBP13.61□□□□□ -0.23
CSDC2-201ENST00000306149 CALCRP30988 508 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 ARHGAP40Q5TG30 622 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 KRT77Q7Z794 578 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 GKN2Q86XP6 184 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 NAXDQ8IW45 347 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 SMRP1Q8NCR6 262 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 OR6N1Q8NGY5 312 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 DUSP19Q8WTR2 217 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 SESN1Q9Y6P5 492 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 FER1L5A0AVI2 2057 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 VPS13AQ96RL7 3174 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 ASCC3Q8N3C0 2202 aaKnown RBP13.61□□□□□ -0.23
CSDC2-201ENST00000306149 IGKV3D-11A0A0A0MRZ8 115 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 TEX46H3BTG2 121 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 ARPC5O15511 151 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 NMBP08949 121 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 HOXD4P09016 255 aaPredicted RBP13.61□□□□□ -0.23
CSDC2-201ENST00000306149 PPP3CBP16298 524 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 CD38P28907 300 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 GALNSP34059 522 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 RPL27P61353 136 aaKnown RBP13.61□□□□□ -0.23
CSDC2-201ENST00000306149 LANCL3Q6ZV70 420 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 MAMDC2Q7Z304 686 aaPredicted RBP13.61□□□□□ -0.23
CSDC2-201ENST00000306149 GPR119Q8TDV5 335 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 SCARB1Q8WTV0 552 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 OIT3Q8WWZ8 545 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 MRTO4Q9UKD2 239 aaKnown RBP13.61□□□□□ -0.23
CSDC2-201ENST00000306149 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
CSDC2-201ENST00000306149 IGHV1OR15-9A0A0B4J2B8 117 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 DCDC2BA2VCK2 349 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 FITM1A5D6W6 292 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 SMAD9O15198 467 aaKnown RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ABCD3P28288 659 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 RAB11BQ15907 218 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 DCAF12L2Q5VW00 463 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 OR10K2Q6IF99 312 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 TMUB2Q71RG4 321 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 OVCH2Q7RTZ1 564 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ZNF679Q8IYX0 411 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 MUC20Q8N307 709 aaPredicted RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 OR51A2Q8NGJ7 313 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 OR1J4Q8NGS1 313 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 OR1L3Q8NH93 324 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 THAP3Q8WTV1 239 aaPredicted RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 THRSPQ92748 146 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ZNF587Q96SQ5 575 aaPredicted RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 MKL2Q9ULH7 1088 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 TMEM272A0A1B0GTI8 110 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 LILRA5A6NI73 299 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 RHPN2P1A8MT19 583 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 TSPAN2O60636 221 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ZNF35P13682 527 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms