RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CHRNA9Q9UGM1 479 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 CACFD1Q9UGQ2 172 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 A6NNC1 897 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 H0YIZ8 118 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 PRKNO60260 465 aaPredicted RBP13.08□□□□□ -0.32
CDT1-201ENST00000301019 LEFTY1O75610 366 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 PMS2P2O95744 297 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 CYB5AP00167 134 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 CSF1P09603 554 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 APLNRP35414 380 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 ASCL1P50553 236 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 MOGAT2Q3SYC2 334 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 CAMK1GQ96NX5 476 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 CNN2Q99439 309 aaKnown RBP13.08□□□□□ -0.32
CDT1-201ENST00000301019 TM7SF3Q9NS93 570 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 CFAP54Q96N23 3096 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 EREGO14944 169 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 PLGP00747 810 aaPredicted RBP13.08□□□□□ -0.32
CDT1-201ENST00000301019 ITGA5P08648 1049 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 TYRP1P17643 537 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 GALP22466 123 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 RASGEF1BQ0VAM2 473 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 ZNF793Q6ZN11 406 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 TMEFF1Q8IYR6 380 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 CYB5D2Q8WUJ1 264 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 KCNG2Q9UJ96 466 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 SLC35A3Q9Y2D2 325 aa13.08□□□□□ -0.32
CDT1-201ENST00000301019 AIFM1O95831 613 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 SOD3P08294 240 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 HOXB5P09067 269 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 FAM157CP0CG43 387 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 LAG3P18627 525 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 CAV2P51636 162 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 C2orf76Q3KRA6 126 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 RPL13AP3Q6NVV1 102 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 C10orf53Q8N6V4 93 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 OR7G2Q8NG99 324 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 CMKLR1Q99788 373 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 ZNF281Q9Y2X9 895 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 HEATR5AQ86XA9 2040 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 WDR87Q6ZQQ6 2873 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 ZNF736B4DX44 427 aaPredicted RBP13.07□□□□□ -0.32
CDT1-201ENST00000301019 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 TSTD3H0UI37 97 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 GLI4P10075 376 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 METAP1P53582 386 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 HSD17B7P56937 341 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 SPCS3P61009 180 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 OR1Q1Q15612 314 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 DECR1Q16698 335 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 C17orf64Q86WR6 236 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 SLC35A4Q96G79 324 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 PPP4R1LQ9P1A2 415 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 KLHDC2Q9Y2U9 406 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 ZNF354AO60765 605 aaPredicted RBP13.07□□□□□ -0.32
CDT1-201ENST00000301019 OR2C1O95371 312 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 SCGB1D2O95969 90 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 GIMD1P0DJR0 217 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
CDT1-201ENST00000301019 PSMB6P28072 239 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 NSUN5P2Q63ZY6 315 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 MRPL10Q7Z7H8 261 aaKnown RBP13.07□□□□□ -0.32
CDT1-201ENST00000301019 KDM8Q8N371 416 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 ALX4Q9H161 411 aaPredicted RBP13.07□□□□□ -0.32
CDT1-201ENST00000301019 FLRT3Q9NZU0 649 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 IL17BQ9UHF5 180 aa13.07□□□□□ -0.32
CDT1-201ENST00000301019 PCYT1BQ9Y5K3 369 aaPredicted RBP13.07□□□□□ -0.32
CDT1-201ENST00000301019 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 A0A1W2PPC1 479 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 MCIDASD6RGH6 385 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 FOXE1O00358 373 aaPredicted RBP13.06□□□□□ -0.32
CDT1-201ENST00000301019 CLDN4O14493 209 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 TNFSF12O43508 249 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 PCCBP05166 539 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 CD79AP11912 226 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 NNATQ16517 81 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 CLEC12BQ2HXU8 276 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 KHDC3LQ587J8 217 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 PLPP4Q5VZY2 271 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 SLC35D2Q76EJ3 337 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 OR5AK2Q8NH90 309 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 GAL3ST4Q96RP7 486 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 CALML5Q9NZT1 146 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 DBX1A6NMT0 343 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 NDUFS4O43181 175 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 XRCC3O43542 346 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 PRH1P02810 166 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 RAB40ALP0C0E4 278 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 GAAP10253 952 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 SFTPCP11686 197 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 BATFQ16520 125 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 FCRL6Q6DN72 434 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms