RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 NUDT1P36639 197 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 RFC3P40938 356 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 PCBP4P57723 403 aaKnown RBP13.48□□□□□ -0.25
CDH23-202ENST00000299366 ACY1Q03154 408 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 UBE3DQ7Z6J8 389 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 HSD17B11Q8NBQ5 300 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 FBLIM1Q8WUP2 373 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 KTI12Q96EK9 354 aaPredicted RBP13.48□□□□□ -0.25
CDH23-202ENST00000299366 HRASLSQ9HDD0 168 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 SIGLEC7Q9Y286 467 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 PPIL1Q9Y3C6 166 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 CADP27708 2225 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 BORCS7-ASMTA0A0B4J1R7 106 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 IMPA2O14732 288 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 NR2C1P13056 603 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 ZNF93P35789 620 aaPredicted RBP13.48□□□□□ -0.25
CDH23-202ENST00000299366 DAP3P51398 398 aaKnown RBP13.48□□□□□ -0.25
CDH23-202ENST00000299366 MTCP1P56278 107 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 PMPCAQ10713 525 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 CCINQ13939 588 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 USF2Q15853 346 aaPredicted RBP13.48□□□□□ -0.25
CDH23-202ENST00000299366 RAB3CQ96E17 227 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 SLCO1C1Q9NYB5 712 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 OR6C68A6NDL8 312 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 YPEL5P62699 121 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 TMEM88Q6PEY1 159 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
CDH23-202ENST00000299366 CLCC1Q96S66 551 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 TEX101Q9BY14 249 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 C1orf198Q9H425 327 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 POFUT1Q9H488 388 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 PCDHGA5Q9Y5G8 931 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 PKDREJQ9NTG1 2253 aa13.48□□□□□ -0.25
CDH23-202ENST00000299366 LOC107986453A0A1B0GWG9 222 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 SMCO3A2RU48 225 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 GUSBP08236 651 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 CDK5Q00535 292 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 FMODQ06828 376 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 LTC4SQ16873 150 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 PHLDA2Q53GA4 152 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 CAMKMTQ7Z624 323 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 OR51E1Q8TCB6 317 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 GLYATL2Q8WU03 294 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 ST8SIA2Q92186 375 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 ZNF707Q96C28 371 aaPredicted RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 C20orf24Q9BUV8 137 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 OR52A1Q9UKL2 312 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 IGHV3-15A0A0B4J1V0 119 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 EFCAB7A8K855 629 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 IL32P24001 234 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 OPRM1P35372 400 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 ZNF529Q6P280 563 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 PPP1R3BQ86XI6 285 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 SULF2Q8IWU5 870 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 ZBTB44Q8NCP5 570 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 PHOSPHO2Q8TCD6 241 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 PRRT1Q99946 306 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 SLC5A6Q9Y289 635 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 MRPS28Q9Y2Q9 187 aaKnown RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 PRAMEF25A6NGN4 478 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 BCAT2O15382 392 aaPredicted RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 STK17BO94768 372 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 NSA2O95478 260 aaKnown RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 IGHG1P01857 330 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 ADRA2AP08913 450 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 TRAPPC2P0DI81 140 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 TRAPPC2BP0DI82 140 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 CXCL3P19876 107 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 COL9A1P20849 921 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 RPS18P62269 152 aaKnown RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 STAC2Q6ZMT1 411 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 FNDC9Q8TBE3 224 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 CMBLQ96DG6 245 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 LINC00615Q96LM1 132 aaPredicted RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 ARPC5LQ9BPX5 153 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 CHRDQ9H2X0 955 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 FGF20Q9NP95 211 aaPredicted RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 MEX3AA1L020 520 aaKnown RBP13.47□□□□□ -0.25
CDH23-202ENST00000299366 THBS1P07996 1170 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 PET100P0DJ07 73 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 ACHEP22303 614 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 HMGA2P52926 109 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 C2orf76Q3KRA6 126 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 GLIPR1L1Q6UWM5 242 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 VASH2Q86V25 355 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 SUCNR1Q9BXA5 334 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 ANKRD19PQ9H560 264 aa13.47□□□□□ -0.25
CDH23-202ENST00000299366 TRAV36DV7A0A075B6V5 113 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 LANCL1O43813 399 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 MED6O75586 246 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 CXCL12P48061 93 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 MRPS21P82921 87 aaKnown RBP13.46□□□□□ -0.25
CDH23-202ENST00000299366 CLINT1Q14677 625 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 ZFP82Q8N141 532 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 ARL11Q969Q4 196 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 S100PBPQ96BU1 408 aa13.46□□□□□ -0.25
CDH23-202ENST00000299366 WDR89Q96FK6 387 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms