RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TAS2R19P59542 299 aa13.51□□□□□ -0.25
SPIDR-201ENST00000297423 OR14C36Q8NHC7 312 aa13.51□□□□□ -0.25
SPIDR-201ENST00000297423 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
SPIDR-201ENST00000297423 LCN9Q8WX39 176 aa13.51□□□□□ -0.25
SPIDR-201ENST00000297423 PUS1Q9Y606 427 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPIDR-201ENST00000297423 METTL12A8MUP2 240 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 OR2F2O95006 317 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 TBX6O95947 436 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 SERPINF1P36955 418 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 DLX2Q07687 328 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ILF3Q12906 894 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■■■□ 21.1
SPIDR-201ENST00000297423 SKP2Q13309 424 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 OR2F1Q13607 317 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF776Q68DI1 518 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 SLC48A1Q6P1K1 146 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 BAP18Q8IXM2 172 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 CMBLQ96DG6 245 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 TIMP4Q99727 224 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ELL3Q9HB65 397 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 SCN8AQ9UQD0 1980 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 A0A1W2PP55 124 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 IGLON5A6NGN9 336 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 SULT1B1O43704 296 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 DBIP07108 87 aaKnown RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ABCD3P28288 659 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 F2RL1P55085 397 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 PPP2CBP62714 309 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 PPP2CAP67775 309 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 CYB5R2Q6BCY4 276 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ABHD17CQ6PCB6 329 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 FRMD1Q8N878 549 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 GPR148Q8TDV2 347 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF514Q96K75 400 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 PCBD2Q9H0N5 130 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 STARD5Q9NSY2 213 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 PTPRZ1P23471 2315 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 DCTN6O00399 190 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 GPRIN2O60269 458 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ADAM11O75078 769 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 SNAPC5O75971 98 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ZIC2O95409 532 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 P2RY2P41231 377 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 RPL13AP3Q6NVV1 102 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF529Q6P280 563 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF101Q8IZC7 436 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF619Q8N2I2 560 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 OR2L2Q8NH16 312 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF563Q8TA94 476 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 ROBO4Q8WZ75 1007 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 FGF11Q92914 225 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 JSRP1Q96MG2 331 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-201ENST00000297423 MED9Q9NWA0 146 aa13.5□□□□□ -0.25
SPIDR-201ENST00000297423 A0A1W2PPH5 198 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 ADH1BP00325 375 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 KNG1P01042 644 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 PPP1R1AQ13522 171 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 ALKBH1Q13686 389 aaKnown RBP13.49□□□□□ -0.25
SPIDR-201ENST00000297423 CLEC9AQ6UXN8 241 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 GVQW1Q8N7I0 195 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF565Q8N9K5 539 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 OR6N1Q8NGY5 312 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 NUDCD2Q8WVJ2 157 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 MS4A6EQ96DS6 147 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 MRPS33Q9Y291 106 aaKnown RBP13.49□□□□□ -0.25
SPIDR-201ENST00000297423 TRAV14DV4A0A0A6YYC5 116 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 SLC35G6P0C7Q6 338 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 ACER2Q5QJU3 275 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 OR2L5Q8NG80 312 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 SECTM1Q8WVN6 248 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 SLC31A1O15431 190 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 LRP3O75074 770 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 PMP2P02689 132 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 ERCC1P07992 297 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-201ENST00000297423 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 ZNF425Q6IV72 752 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 JMJD6Q6NYC1 403 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-201ENST00000297423 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 INSM2Q96T92 566 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-201ENST00000297423 SPACA6W5XKT8 324 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 TRPM6Q9BX84 2022 aa13.49□□□□□ -0.25
SPIDR-201ENST00000297423 CTDSPLO15194 276 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 YIF1AO95070 293 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 HOXB2P14652 356 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 ADRA2CP18825 462 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 FBXW4P57775 412 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 ZNHIT3Q15649 155 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-201ENST00000297423 CCDC3Q9BQI4 270 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 NAA11Q9BSU3 229 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-201ENST00000297423 TRIM2Q9C040 744 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 PELI2Q9HAT8 420 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 GRHPRQ9UBQ7 328 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 DHDHQ9UQ10 334 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 YKT6O15498 198 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 XRCC3O43542 346 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 NME2P1O60361 137 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 SRPX2O60687 465 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-201ENST00000297423 CLEC3AO75596 197 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 TSPAN15O95858 294 aa13.48□□□□□ -0.25
SPIDR-201ENST00000297423 GLI4P10075 376 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms