RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 MAB21L1Q13394 359 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ALKBH2Q6NS38 261 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 UEVLDQ8IX04 471 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 BATF2Q8N1L9 274 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF283Q8N7M2 679 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 OR13C9Q8NGT0 318 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 DNASE2BQ8WZ79 361 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 FGGYQ96C11 551 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 DDIT4LQ96D03 193 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ST6GAL2Q96JF0 529 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 DIABLOQ9NR28 239 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 TAS2R4Q9NYW5 299 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 MYOTQ9UBF9 498 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 C19orf25Q9UFG5 118 aaPredicted RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 CEP192Q8TEP8 1941 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 A0A0A6YYJ9 748 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 A0A0B4J293 547 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 EIF4E2O60573 245 aaKnown RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 RBBP9O75884 186 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 KRT33AO76009 404 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ANKRD34CP0C6C1 535 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 HOXD12P35452 270 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 POU3F4P49335 361 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 AGFG1P52594 562 aaKnown RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 HSF1Q00613 529 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 MYBPHQ13203 477 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 H1FNTQ75WM6 255 aaPredicted RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 SYS1Q8N2H4 156 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ASCC1Q8N9N2 400 aaKnown RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 OR51A2Q8NGJ7 313 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 SLC22A8Q8TCC7 542 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 SLC19A3Q9BZV2 496 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ARRDC1-AS1Q9H2J1 176 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 PLEKHA1Q9HB21 404 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ASH2LQ9UBL3 628 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 DKKL1Q9UK85 242 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ING4Q9UNL4 249 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ARPC4-TTLL3A0A0A6YYG9 625 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 NSG1A0A0A6YYJ2 146 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 SIX6O95475 246 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 CFL1P23528 166 aaKnown RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 STARP49675 285 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 CLDN17P56750 224 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 MFGE8Q08431 387 aaPredicted RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 LRRC37A5PQ49AS3 106 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 C4orf46Q504U0 113 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 CD163Q86VB7 1156 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 LIX1LQ8IVB5 337 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 TEX19Q8NA77 164 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 APCDD1LQ8NCL9 501 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 GIMAP1Q8WWP7 306 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 LIPHQ8WWY8 451 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 HPF1Q9NWY4 346 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 MOKQ9UQ07 419 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF407Q9C0G0 2248 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 IGKV3D-11A0A0A0MRZ8 115 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 IGKV1D-43A0A0B4J1Z2 117 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 H3BMH7 237 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 GPRIN2O60269 458 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ANXA7P20073 488 aaKnown RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 STOMP27105 288 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 MAPK3P27361 379 aaPredicted RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 EFNB2P52799 333 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 SLC26A5P58743 744 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 SHBQ15464 509 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 SGCBQ16585 318 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ISXQ2M1V0 245 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 SLC35D3Q5M8T2 416 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 PLXDC2Q6UX71 529 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 OVCH1Q7RTY7 1134 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ABHD12BQ7Z5M8 362 aaPredicted RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ZSCAN1Q8NBB4 408 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF431Q8TF32 576 aaPredicted RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 TNFAIP8L1Q8WVP5 186 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 DDOQ99489 341 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 TXNIPQ9H3M7 391 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 OR5V1Q9UGF6 321 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 POLEQ07864 2286 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 SLC22A23A1A5C7 686 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 PLPP3O14495 311 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 OGG1O15527 345 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 RAMP1O60894 148 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 TMEM127O75204 238 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 UBL3O95164 117 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 DPP4P27487 766 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 RBMS1P29558 406 aaKnown RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 CRABP1P29762 137 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 GGTLC2Q14390 218 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 CCDC92Q53HC0 331 aaPredicted RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 YIF1BQ5BJH7 314 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 COX15Q7KZN9 410 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 TRILQ7L0X0 811 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 GALNTL5Q7Z4T8 443 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 OTOSQ8NHW6 89 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 RGP1Q92546 391 aaPredicted RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 NAT6Q93015 286 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 KCNJ15Q99712 375 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF768Q9H5H4 540 aaKnown RBP8.35□□□□□ -1.07
PRDM9-201ENST00000296682 ABRACLQ9P1F3 81 aa8.35□□□□□ -1.07
PRDM9-201ENST00000296682 MGAT4AQ9UM21 535 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms