RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 GZMKP49863 264 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 RPS15P62841 145 aaKnown RBP21.47■■□□□ 1.03
TRIM54-201ENST00000296098 BTN2A1Q7KYR7 527 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 NDUFAF7Q7L592 441 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 MDGA2Q7Z553 956 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 WDFY1Q8IWB7 410 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 C15orf40Q8WUR7 153 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 SPACA9Q96E40 222 aaPredicted RBP21.47■■□□□ 1.03
TRIM54-201ENST00000296098 NXT1Q9UKK6 140 aaKnown RBP21.47■■□□□ 1.03
TRIM54-201ENST00000296098 B3GALT5Q9Y2C3 310 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 A0A1W2PNV4 684 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 RAD1O60671 282 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 TCEA1P23193 301 aaKnown RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 STOMP27105 288 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 FAPQ12884 760 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 CLPPQ16740 277 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 PEAR1Q5VY43 1037 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 POC1BQ8TC44 478 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 RASL10BQ96S79 203 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 TRAF4Q9BUZ4 470 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 DHDHQ9UQ10 334 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 B3GALT1Q9Y5Z6 326 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 EFNA2O43921 213 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 LDOC1O95751 146 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 H2AFB2P0C5Z0 115 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 CSRP1P21291 193 aaKnown RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 RAG2P55895 527 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 TAS2R20P59543 309 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 OR2M2Q96R28 347 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 CMKLR1Q99788 373 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 FANCFQ9NPI8 374 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 SERINC1Q9NRX5 453 aa21.46■■□□□ 1.03
TRIM54-201ENST00000296098 ZNF275Q9NSD4 429 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 MRPL15Q9P015 296 aaKnown RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 GPN3Q9UHW5 284 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-201ENST00000296098 LAMTOR5O43504 91 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 GDF9O60383 454 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 KHDRBS3O75525 346 aaKnown RBP21.45■■□□□ 1.02
TRIM54-201ENST00000296098 MYBPHQ13203 477 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 FCN2Q15485 313 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 BTBD16Q32M84 506 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 GLB1L2Q8IW92 636 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 SLC7A5P1Q8MH63 180 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 ZFAND1Q8TCF1 268 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 PPP1R14AQ96A00 147 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 HRASLSQ9HDD0 168 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 R4GMQ9 66 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 SPEGQ15772 3267 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 FREM3P0C091 2139 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 ACOT7O00154 380 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 SRSF10O75494 262 aaKnown RBP21.45■■□□□ 1.02
TRIM54-201ENST00000296098 TPPPO94811 219 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 ZNF28P17035 718 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 PCOLCEQ15113 449 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 PCK2Q16822 640 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 C3orf33Q6P1S2 294 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 DCXRQ7Z4W1 244 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 OR2M3Q8NG83 312 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 GTPBP2Q9BX10 602 aaKnown RBP21.45■■□□□ 1.02
TRIM54-201ENST00000296098 ACTR6Q9GZN1 396 aa21.45■■□□□ 1.02
TRIM54-201ENST00000296098 IGKV1D-43A0A0B4J1Z2 117 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 NAP1L6A6NFF2 107 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 TTLL8A6PVC2 850 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 PATE3B3GLJ2 98 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 AQP8O94778 261 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 DKK1O94907 266 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 TMIGD3P0DMS9 266 aaPredicted RBP21.44■■□□□ 1.02
TRIM54-201ENST00000296098 BMPERQ8N8U9 685 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 OR56B4Q8NH76 319 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 ST7LQ8TDW4 575 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 ELP5Q8TE02 316 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 C20orf85Q9H1P6 137 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 OR51J1Q9H342 316 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 SLA2Q9H6Q3 261 aa21.44■■□□□ 1.02
TRIM54-201ENST00000296098 FAM47E-STBD1D6RA91 191 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 GLSO94925 669 aaPredicted RBP21.43■■□□□ 1.02
TRIM54-201ENST00000296098 CD2P06729 351 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 BIDP55957 195 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 PLA2G7Q13093 441 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 GSG1Q2KHT4 349 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 LINC00346Q8IVM7 164 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 PHF21AQ96BD5 680 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 CKLFQ9UBR5 152 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 KLK11Q9UBX7 282 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 FBXL2Q9UKC9 423 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 FBXL3Q9UKT7 428 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 RPH3AQ9Y2J0 694 aaPredicted RBP21.43■■□□□ 1.02
TRIM54-201ENST00000296098 EMC9Q9Y3B6 208 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 LOC102723996A0A087X1L8 192 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 CER1O95813 267 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 TNK1Q13470 666 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 INPP5JQ15735 1006 aaPredicted RBP21.43■■□□□ 1.02
TRIM54-201ENST00000296098 RAB11BQ15907 218 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 CD276Q5ZPR3 534 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 TMEM225Q6GV28 225 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 ASPHD2Q6ICH7 369 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 AGBL5Q8NDL9 886 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 GIMAP1Q8WWP7 306 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 ASB5Q8WWX0 329 aa21.43■■□□□ 1.02
TRIM54-201ENST00000296098 B3GAT1Q9P2W7 334 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms