RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TOP3AQ13472 1001 aaPredicted RBP16.68■□□□□ 0.26
CXCL3-201ENST00000296026 LRRC23Q53EV4 343 aaPredicted RBP16.68■□□□□ 0.26
CXCL3-201ENST00000296026 CYBRD1Q53TN4 286 aa16.68■□□□□ 0.26
CXCL3-201ENST00000296026 COQ5Q5HYK3 327 aa16.68■□□□□ 0.26
CXCL3-201ENST00000296026 FAM27BQ5VT28 67 aa16.68■□□□□ 0.26
CXCL3-201ENST00000296026 HDXQ7Z353 690 aa16.68■□□□□ 0.26
CXCL3-201ENST00000296026 IPCEF1Q8WWN9 437 aaPredicted RBP16.68■□□□□ 0.26
CXCL3-201ENST00000296026 MARS2Q96GW9 593 aaKnown RBP16.68■□□□□ 0.26
CXCL3-201ENST00000296026 TIMD4Q96H15 378 aa16.68■□□□□ 0.26
CXCL3-201ENST00000296026 HIF3AQ9Y2N7 669 aa16.68■□□□□ 0.26
CXCL3-201ENST00000296026 NBEAL1Q6ZS30 2694 aa16.68■□□□□ 0.26
CXCL3-201ENST00000296026 LOC105371242A0A075B767 164 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 GMNCA6NCL1 334 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 SPRY3O43610 288 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 IGHV1-46P01743 117 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 IGHV2-5P01817 119 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 IFI30P13284 250 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 MAKP20794 623 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 KDELR2P33947 212 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 MMP15P51511 669 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 RPL27P61353 136 aaKnown RBP16.67■□□□□ 0.26
CXCL3-201ENST00000296026 ST3GAL3Q11203 375 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 TAF11Q15544 211 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 TMEM255AQ5JRV8 349 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 FAM209AQ5JX71 171 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 UNQ6126/PRO20091Q6UXV3 157 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 TEX29Q8N6K0 151 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 CLDN22Q8N7P3 220 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 SLC25A40Q8TBP6 338 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 RAB1CQ92928 201 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 BPIFA2Q96DR5 249 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 ELMOD3Q96FG2 381 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 TPD52L3Q96J77 140 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 RBP7Q96R05 134 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 ALG12Q9BV10 488 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 OR2J1Q9GZK6 312 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 PCDHB10Q9UN67 800 aa16.67■□□□□ 0.26
CXCL3-201ENST00000296026 A0A0G2JMP0 313 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 A0A0X1KG70 313 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 PLSCR5A0PG75 271 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 BBIP1A8MTZ0 92 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 EPHA1P21709 976 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 CFPP27918 469 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 LAP3P28838 519 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 KLF10Q13118 480 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 MBNL2Q5VZF2 373 aaKnown RBP16.66■□□□□ 0.26
CXCL3-201ENST00000296026 IGFN1Q86VF2 1251 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 ALDH16A1Q8IZ83 802 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 OR4M2Q8NGB6 313 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 FNDC8Q8TC99 324 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 KLF14Q8TD94 323 aaPredicted RBP16.66■□□□□ 0.26
CXCL3-201ENST00000296026 CCL17Q92583 94 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 PRRC1Q96M27 445 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 TMPRSS13Q9BYE2 586 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 OR2H1Q9GZK4 316 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 WNT5BQ9H1J7 359 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 VIPAS39Q9H9C1 493 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 MRGBPQ9NV56 204 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 A4GNTQ9UNA3 340 aa16.66■□□□□ 0.26
CXCL3-201ENST00000296026 LOC100653049A0A140TA62 436 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 ZSCAN5BA6NJL1 495 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 FAM220BPB1ANY3 271 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 KRT34O76011 436 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 IGHMP01871 453 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 CST2P09228 141 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 CTXN1P60606 82 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 PPP1CBP62140 327 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 ACTG1P63261 375 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 MAPRE2Q15555 327 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 RFPL4BQ6ZWI9 263 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 C1orf174Q8IYL3 243 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 OR2T12Q8NG77 320 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 ABHD4Q8TB40 342 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 TIMM10BQ9Y5J6 103 aa16.65■□□□□ 0.26
CXCL3-201ENST00000296026 ANK2Q01484 3957 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 A0A1W2PPL8 197 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 HTR3EA5X5Y0 456 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 NGFP01138 241 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 TROVE2P10155 538 aaKnown RBP eCLIP16.64■□□□□ 0.25
CXCL3-201ENST00000296026 FUT4P22083 530 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 IFNA8P32881 189 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 GUCA1AP43080 201 aaPredicted RBP16.64■□□□□ 0.25
CXCL3-201ENST00000296026 HILS1P60008 231 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 PCBD1P61457 104 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 SELENOWP63302 87 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 SF3A3Q12874 501 aaKnown RBP eCLIP16.64■□□□□ 0.25
CXCL3-201ENST00000296026 DCAF12L2Q5VW00 463 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 USP43Q70EL4 1123 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 ZNF771Q7L3S4 317 aaPredicted RBP16.64■□□□□ 0.25
CXCL3-201ENST00000296026 C1QL2Q7Z5L3 287 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 MICU2Q8IYU8 434 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 LRRC75AQ8NAA5 344 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 PCYOX1LQ8NBM8 494 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 OR51A7Q8NH64 312 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 GAL3ST1Q99999 423 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 EGLN1Q9GZT9 426 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 SAR1AQ9NR31 198 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 CYSLTR2Q9NS75 346 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 GID8Q9NWU2 228 aa16.64■□□□□ 0.25
CXCL3-201ENST00000296026 RHCGQ9UBD6 479 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms