RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 DPP4P27487 766 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 SFTPDP35247 375 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 RFX2P48378 723 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 CD97P48960 835 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 CCR9P51686 369 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 B3GALT5-AS1P59052 145 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 GABREP78334 506 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 TMEM176BQ3YBM2 270 aaPredicted RBP8.17□□□□□ -1.1
PDPN-201ENST00000294489 DCAF10Q5QP82 559 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 B3GNTL1Q67FW5 361 aaPredicted RBP8.17□□□□□ -1.1
PDPN-201ENST00000294489 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 ASB18Q6ZVZ8 466 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 MDGA2Q7Z553 956 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 OR4M1Q8NGD0 313 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 ENKURQ8TC29 256 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 RNF128Q8TEB7 428 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 ITPKCQ96DU7 683 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 TXNDC15Q96J42 360 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 C4orf45Q96LM5 186 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 MRI1Q9BV20 369 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 C11orf54Q9H0W9 315 aaPredicted RBP8.17□□□□□ -1.1
PDPN-201ENST00000294489 SACM1LQ9NTJ5 587 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 FAM86C1Q9NVL1 165 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 B3GAT1Q9P2W7 334 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 IL17BQ9UHF5 180 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 SPATA2Q9UM82 520 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 ARPC4-TTLL3A0A0A6YYG9 625 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 A0A0G2JMP0 313 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 TRBV5-5A0A0J9YX44 114 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 A0A0X1KG70 313 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 A0A1W2PNR3 127 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 LRRC3CA6NJW4 275 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 ZNF254O75437 659 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 PMS2P2O95744 297 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 PSKH1P11801 424 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 PTGS2P35354 604 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 SOX2P48431 317 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 SLC35A1P78382 337 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 FOXK1P85037 733 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 FMODQ06828 376 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 AIMP2Q13155 320 aaKnown RBP8.16□□□□□ -1.1
PDPN-201ENST00000294489 OTPQ5XKR4 325 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 PYHIN1Q6K0P9 492 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 TMPRSS7Q7RTY8 843 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 GPAT4Q86UL3 456 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 BEST3Q8N1M1 668 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 CELF2-AS1Q8N7Q2 184 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 SLC26A10Q8NG04 563 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 OR4M2Q8NGB6 313 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 OR52N5Q8NH56 324 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 HPS1Q92902 700 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 JSRP1Q96MG2 331 aaPredicted RBP8.16□□□□□ -1.1
PDPN-201ENST00000294489 KCNJ15Q99712 375 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 ABHD6Q9BV23 337 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 HDHD2Q9H0R4 259 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 SLC25A18Q9H1K4 315 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 GTF2A1LQ9UNN4 478 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 V9GY05 133 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 A0A1B0GTH9 108 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 IFITM5A6NNB3 132 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 AIPO00170 330 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 SULT2B1O00204 365 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 GPR171O14626 319 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 SNRPBP14678 240 aaKnown RBP8.16□□□□□ -1.1
PDPN-201ENST00000294489 SRD5A2P31213 254 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 H3F3AP84243 136 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 PITPNAQ00169 270 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 TEX30Q5JUR7 227 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 THEM4Q5T1C6 240 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 SPATC1Q76KD6 591 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 GLB1L2Q8IW92 636 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 IL17RDQ8NFM7 739 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 OR10H5Q8NGA6 315 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 MIB2Q96AX9 1013 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 THOC3Q96J01 351 aaKnown RBP8.16□□□□□ -1.1
PDPN-201ENST00000294489 CMTM3Q96MX0 182 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 GNRHR2Q96P88 292 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 NEDD4LQ96PU5 975 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 EMC6Q9BV81 110 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 TMEM165Q9HC07 324 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 KLHL9Q9P2J3 617 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 DKKL1Q9UK85 242 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 AQP8O94778 261 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 IGHG1P01857 330 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 HRGP04196 525 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 ZNF43P17038 809 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 CNR1P21554 472 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 MAGEB1P43366 347 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 MAP2K3P46734 347 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 CLRN1P58418 232 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 C19orf57Q0VDD7 668 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 WDR38Q5JTN6 314 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 RAET1LQ5VY80 246 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 ZNF57Q68EA5 555 aaPredicted RBP8.16□□□□□ -1.1
PDPN-201ENST00000294489 OR7E24Q6IFN5 339 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 BAIAP2L2Q6UXY1 529 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 STAC2Q6ZMT1 411 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 TMPPEQ6ZT21 453 aa8.16□□□□□ -1.1
PDPN-201ENST00000294489 AKAP14Q86UN6 197 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms