RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 MRGPRX4Q96LA9 322 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 C9J4A7 227 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 PHYHO14832 338 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 ZNF208O43345 1280 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 ARSBP15848 533 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 ZNF823P16415 610 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 GIFP27352 417 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 DAP3P51398 398 aaKnown RBP17.06■□□□□ 0.32
SHF-201ENST00000290894 DUSP3P51452 185 aaPredicted RBP17.06■□□□□ 0.32
SHF-201ENST00000290894 MMP15P51511 669 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 TMEM176BQ3YBM2 270 aaPredicted RBP17.06■□□□□ 0.32
SHF-201ENST00000290894 SLC23A3Q6PIS1 610 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 GNRHR2Q96P88 292 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 MFRPQ9BY79 579 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHF-201ENST00000290894 WDR54Q9H977 334 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 ZNF160Q9HCG1 818 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 CENPMQ9NSP4 180 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 CAMK2AQ9UQM7 478 aa17.06■□□□□ 0.32
SHF-201ENST00000290894 LOC101059948A0A1B0GTJ6 334 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 DKK1O94907 266 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 RIDAP52758 137 aaKnown RBP17.05■□□□□ 0.32
SHF-201ENST00000290894 PLA1AQ53H76 456 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 OR52N5Q8NH56 324 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 RNF128Q8TEB7 428 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 ADAMTS14Q8WXS8 1223 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 SDHAF3Q9NRP4 125 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 ALKBH4Q9NXW9 302 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 ORC5O43913 435 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 CCL3P10147 92 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 MFSD13AQ14CX5 517 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 KCTD18Q6PI47 426 aaPredicted RBP17.05■□□□□ 0.32
SHF-201ENST00000290894 PLPP7Q8NBV4 271 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 RHBDD1Q8TEB9 315 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 ASB17Q8WXJ9 295 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 CMKLR1Q99788 373 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 ARRDC1-AS1Q9H2J1 176 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 CDCP1Q9H5V8 836 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 MCUBQ9NWR8 336 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 KLK11Q9UBX7 282 aa17.05■□□□□ 0.32
SHF-201ENST00000290894 GPR171O14626 319 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 GDNFP39905 211 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 PITPNAQ00169 270 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 ASPHD2Q6ICH7 369 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 TRBV5-7A0A0A0MS05 114 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 A6NIZ1 184 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 CENPXA8MT69 81 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 SYPP08247 313 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 CDK2P24941 298 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 RAP1BP61224 184 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 RAP1AP62834 184 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 MRPS15P82914 257 aaKnown RBP17.04■□□□□ 0.32
SHF-201ENST00000290894 MC2RQ01718 297 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 ZP4Q12836 540 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 MRPL28Q13084 256 aaKnown RBP17.04■□□□□ 0.32
SHF-201ENST00000290894 MFAP5Q13361 173 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 TEX30Q5JUR7 227 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 C3orf33Q6P1S2 294 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 DND1Q8IYX4 353 aaKnown RBP17.04■□□□□ 0.32
SHF-201ENST00000290894 OR11G2Q8NGC1 345 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 OR52I2Q8NH67 350 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 IMMP1LQ96LU5 166 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 SNX18Q96RF0 628 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 BEX1Q9HBH7 125 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 NXT1Q9UKK6 140 aaKnown RBP17.04■□□□□ 0.32
SHF-201ENST00000290894 B3GALT5Q9Y2C3 310 aa17.04■□□□□ 0.32
SHF-201ENST00000290894 LOC102723996A0A087X1L8 192 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 SMLR1H3BR10 107 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 FCER2P06734 321 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 MSX1P28360 303 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 CDAP32320 146 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 ROM1Q03395 351 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 HYAL4Q2M3T9 481 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 TMEM69Q5SWH9 247 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 ZNF468Q5VIY5 522 aaPredicted RBP17.03■□□□□ 0.32
SHF-201ENST00000290894 TMEM225Q6GV28 225 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 OR51D1Q8NGF3 324 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 SLC39A7Q92504 469 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 MCHR2Q969V1 340 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 GAL3ST1Q99999 423 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 OR2B2Q9GZK3 357 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 SEC61A2Q9H9S3 476 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 PLSCR3Q9NRY6 295 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 LMX1BO60663 402 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 BLVRAP53004 296 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 CLPPQ16740 277 aaPredicted RBP17.03■□□□□ 0.32
SHF-201ENST00000290894 BPHLQ86WA6 291 aaPredicted RBP17.03■□□□□ 0.32
SHF-201ENST00000290894 SMIM4Q8WVI0 70 aa17.03■□□□□ 0.32
SHF-201ENST00000290894 A0A1W2PPL8 197 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 LDOC1O95751 146 aaPredicted RBP17.02■□□□□ 0.32
SHF-201ENST00000290894 ITGA5P08648 1049 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 EFNB2P52799 333 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 SFRP4Q6FHJ7 346 aaPredicted RBP17.02■□□□□ 0.32
SHF-201ENST00000290894 FAAP20Q6NZ36 180 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 OR2Y1Q8NGV0 311 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 ST7LQ8TDW4 575 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 CREB3L1Q96BA8 519 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 S100A16Q96FQ6 103 aaKnown RBP17.02■□□□□ 0.32
SHF-201ENST00000290894 POTEKPQ9BYX7 375 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 NKIRAS2Q9NYR9 191 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms