RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ZNF471Q9BX82 626 aaPredicted RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 WDR13Q9H1Z4 485 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ZNF629Q9UEG4 869 aaPredicted RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 TNFSF18Q9UNG2 199 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 CARHSP1Q9Y2V2 147 aaKnown RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 TMEM14AQ9Y6G1 99 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 BOD1L1Q8NFC6 3051 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 GNB5O14775 395 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CSTAP01040 98 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 GLAP06280 429 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 FABP1P07148 127 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 SMIM6P0DI80 62 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CT45A8P0DMV1 189 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CT45A9P0DMV2 189 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 ADCYAP1P18509 176 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 SKP1P63208 163 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 LTBQ06643 244 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 BIKQ13323 160 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 PRTGQ2VWP7 1150 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CT45A2Q5DJT8 189 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 TMEM196Q5HYL7 178 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 LY6G6FQ5SQ64 297 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 FAM166AQ6J272 317 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 LEG1Q6P5S2 330 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 JAZF1Q86VZ6 243 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 OR51L1Q8NGJ5 315 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 OR51S1Q8NGJ8 323 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 OR6S1Q8NH40 331 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 GPBAR1Q8TDU6 330 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 RASD2Q96D21 266 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CMSS1Q9BQ75 279 aaKnown RBP9.38□□□□□ -0.91
SKA1-201ENST00000285116 MTIF3Q9H2K0 278 aaKnown RBP9.38□□□□□ -0.91
SKA1-201ENST00000285116 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
SKA1-201ENST00000285116 UPB1Q9UBR1 384 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 KIR2DS5A0A0G2JLQ3 304 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 A0A0G2JNG1 304 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 A0A1W2PQF6 199 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 GGT3PA6NGU5 568 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 KIR2DS3K7RE56 304 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 SLC31A1O15431 190 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 YKT6O15498 198 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 SLC25A12O75746 678 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 EIF3GO75821 320 aaKnown RBP eCLIP9.38□□□□□ -0.91
SKA1-201ENST00000285116 GRK6P43250 576 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 KCNJ3P48549 501 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CENPAP49450 140 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 KIR2DS5Q14953 304 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 LIPNQ5VXI9 398 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 C3orf33Q6P1S2 294 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 SKA3Q8IX90 412 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 DEFB119Q8N690 84 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 BCORP1Q8N888 145 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 OR4N2Q8NGD1 307 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 OR6K6Q8NGW6 343 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 ZNF75AQ96N20 296 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 VRK1Q99986 396 aaPredicted RBP9.38□□□□□ -0.91
SKA1-201ENST00000285116 WDR76Q9H967 626 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CLDN16Q9Y5I7 305 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 OR5H14A6NHG9 310 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 S100A8P05109 93 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CRYBA1P05813 215 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 HEXAP06865 529 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 ACAA1P09110 424 aaPredicted RBP9.38□□□□□ -0.91
SKA1-201ENST00000285116 RNH1P13489 461 aaKnown RBP9.38□□□□□ -0.91
SKA1-201ENST00000285116 GTF2F2P13984 249 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 HNRNPA2B1P22626 353 aaKnown RBP9.38□□□□□ -0.91
SKA1-201ENST00000285116 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 ALG11Q2TAA5 492 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 EEF1A1P5Q5VTE0 462 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 C11orf87Q6NUJ2 197 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 LPCAT3Q6P1A2 487 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 OR2G2Q8NGZ5 317 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 CCL4L1Q8NHW4 92 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 NANPQ8TBE9 248 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 COMMD4Q9H0A8 199 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 SEMA6CQ9H3T2 930 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 MMP25Q9NPA2 562 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 ASF1BQ9NVP2 202 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 MKL2Q9ULH7 1088 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 KLHDC2Q9Y2U9 406 aa9.38□□□□□ -0.91
SKA1-201ENST00000285116 NUDT19A8MXV4 375 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 IDSB3KWA1 339 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 SGCEO43556 437 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 ITGB2P05107 769 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 S100A9P06702 114 aaKnown RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 TMIGD3P0DMS9 266 aaPredicted RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 ALOX5APP20292 161 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 SMAD2Q15796 467 aaKnown RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 ACOT7LQ6ZUV0 252 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 MED25Q71SY5 747 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 BOLLQ8N9W6 283 aaKnown RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 STEAP2Q8NFT2 490 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 OR1J4Q8NGS1 313 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 ZNF251Q9BRH9 671 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 CHST6Q9GZX3 395 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 POFUT1Q9H488 388 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 COMMD9Q9P000 198 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 MRPS33Q9Y291 106 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms