RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SLC7A5P1Q8MH63 180 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 NOXO1Q8NFA2 376 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OR1L3Q8NH93 324 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 GPR174Q9BXC1 333 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 CSTL1Q9H114 145 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 GNPTGQ9UJJ9 305 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 POLDIP2Q9Y2S7 368 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SGCEO43556 437 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 FAM157CP0CG43 387 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ATF6P18850 670 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 CDKN2CP42773 168 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 RASSF2P50749 326 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 GLO1Q04760 184 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SERTAD2Q14140 314 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TRMT5Q32P41 509 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 C5orf47Q569G3 176 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 CDKL4Q5MAI5 379 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 HIST2H3PS2Q5TEC6 136 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 C19orf18Q8NEA5 215 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 FCAMRQ8WWV6 532 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 DLX4Q92988 240 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 Q9HAA7 133 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 FOLH1BQ9HBA9 442 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 PRODH2Q9UF12 536 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 AGO1Q9UL18 857 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 SAMD4AQ9UPU9 718 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 SNX10Q9Y5X0 201 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 A0A1B0GTH9 108 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SLC9A3R1O14745 358 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 KRT75O95678 551 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SLC35E2BP0CK96 405 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SLC35E2P0CK97 266 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 BGNP21810 368 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 LMO1P25800 156 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 EVI2BP34910 448 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 MAGEA12P43365 314 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ZBED5Q49AG3 693 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TMEM184AQ6ZMB5 413 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 PDIK1LQ8N165 341 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TPRX1Q8N7U7 411 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SEMA6DQ8NFY4 1073 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OR5K2Q8NHB8 316 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 GTF3AQ92664 365 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 FAF2Q96CS3 445 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 PDLIM2Q96JY6 352 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 Q96MT0 163 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OPALINQ96PE5 141 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OR8B4Q96RC9 309 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 KIR3DX1Q9H7L2 352 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 NT5DC2Q9H857 520 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TESMINQ9Y4I5 508 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ABCA7Q8IZY2 2146 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OVOL3O00110 214 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 MYL12BO14950 172 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 HYAL3O43820 417 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 MGRN1O60291 552 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ANGPTL1O95841 491 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 DCNP07585 359 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 OR8U8P0C7N1 319 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TBPP20226 339 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 QARSP47897 775 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 SRSF1Q07955 248 aaKnown RBP eCLIP2.37□□□□□ -2.03
CHD1-201ENST00000284049 MED21Q13503 144 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ZNF528Q3MIS6 628 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ZNF260Q3ZCT1 412 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SDHAF4Q5VUM1 108 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ASCL5Q7RTU5 278 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 NUFIP2Q7Z417 695 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 STPG4Q8N801 248 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 LRRC29Q8WV35 223 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 RASSF5Q8WWW0 418 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SHARPINQ9H0F6 387 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 FAM96AQ9H5X1 160 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ABCC13Q9NSE7 274 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 EXD2Q9NVH0 621 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 PUS1Q9Y606 427 aaKnown RBP eCLIP2.37□□□□□ -2.03
CHD1-201ENST00000284049 TRBV9A0A0B4J1U6 114 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ANKRD20A5PA0PJZ0 165 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OTOL1A6NHN0 477 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 MGST3O14880 152 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SLC2A1P11166 492 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 MLNP12872 115 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 WT1P19544 449 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 MFAP2P55001 183 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 CCL23P55773 120 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 JAG1P78504 1218 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 BSXQ3C1V8 233 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 LEG1Q6P5S2 330 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 ZNF782Q6ZMW2 699 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 PRR22Q8IZ63 422 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TBC1D19Q8N5T2 526 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OR10V1Q8NGI7 309 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OTUB2Q96DC9 234 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TMA16Q96EY4 203 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 ST6GAL2Q96JF0 529 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 CCM2Q9BSQ5 444 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 UBXN6Q9BZV1 441 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 WDR55Q9H6Y2 383 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 PTGES2Q9H7Z7 377 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 FGF20Q9NP95 211 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms