RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 SMURF2Q9HAU4 748 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 UGT2A1Q9Y4X1 527 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 CACNG2Q9Y698 323 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 ARHGAP32A7KAX9 2087 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 NPIPB13A6NJU9 1138 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 BBIP1A8MTZ0 92 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 FAM220BPB1ANY3 271 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 NPIPB4C9JG80 1138 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 FXYD1O00168 92 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 IGHV3-13P01766 116 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 IGHV2-5P01817 119 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 TROVE2P10155 538 aaKnown RBP eCLIP10.86□□□□□ -0.67
CD44-203ENST00000278386 THRBP10828 461 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 IFI30P13284 250 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 H2AFXP16104 143 aaPredicted RBP10.86□□□□□ -0.67
CD44-203ENST00000278386 MAKP20794 623 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 ZNF133P52736 654 aaPredicted RBP10.86□□□□□ -0.67
CD44-203ENST00000278386 SF3A3Q12874 501 aaKnown RBP eCLIP10.86□□□□□ -0.67
CD44-203ENST00000278386 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 TAF11Q15544 211 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 MAPRE2Q15555 327 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 CYBRD1Q53TN4 286 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 FAM209AQ5JX71 171 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 THEM4Q5T1C6 240 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 METTL21CQ5VZV1 264 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 RFPL4BQ6ZWI9 263 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 HDXQ7Z353 690 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 MICU2Q8IYU8 434 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 ABHD4Q8TB40 342 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 ZFAND2BQ8WV99 257 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 CCL17Q92583 94 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 RAB1CQ92928 201 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 POM121L2Q96KW2 1035 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 PRRC1Q96M27 445 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 ALG12Q9BV10 488 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 G6PC2Q9NQR9 355 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 MRGBPQ9NV56 204 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 UBAP1Q9NZ09 502 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 PCDHB10Q9UN67 800 aa10.86□□□□□ -0.67
CD44-203ENST00000278386 PLPP2O43688 288 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 IGHV1-46P01743 117 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 TSPAN19P0C672 248 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 LAP3P28838 519 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 GUCA1AP43080 201 aaPredicted RBP10.85□□□□□ -0.67
CD44-203ENST00000278386 CTXN1P60606 82 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 RPL27P61353 136 aaKnown RBP10.85□□□□□ -0.67
CD44-203ENST00000278386 PPP1CBP62140 327 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 PSG4Q00888 419 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 ST3GAL3Q11203 375 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 COQ5Q5HYK3 327 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 DCAF12L2Q5VW00 463 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 SLC25A47Q6Q0C1 308 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 ALDH16A1Q8IZ83 802 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 CLDN22Q8N7P3 220 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 OR2T12Q8NG77 320 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 LIPHQ8WWY8 451 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 BPIFA2Q96DR5 249 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 RBP7Q96R05 134 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 OR2J1Q9GZK6 312 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 EGLN1Q9GZT9 426 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 ARGLU1Q9NWB6 273 aaPredicted RBP10.85□□□□□ -0.67
CD44-203ENST00000278386 HIF3AQ9Y2N7 669 aa10.85□□□□□ -0.67
CD44-203ENST00000278386 NBEAL1Q6ZS30 2694 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 LOC100509620A0A075B734 347 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 TRAV27A0A087WT01 109 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 ZSCAN5BA6NJL1 495 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 TRIM77I1YAP6 450 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 TIMM8AO60220 97 aaPredicted RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 DEAF1O75398 565 aaPredicted RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 IGHMP01871 453 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 CST2P09228 141 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 ADRA2CP18825 462 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 CFPP27918 469 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 YAP1P46937 504 aaKnown RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 ARHGDIAP52565 204 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 ARFIP2P53365 341 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 HILS1P60008 231 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 PCBD1P61457 104 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 SLC3A1Q07837 685 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 KLF10Q13118 480 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 ZMAT1Q5H9K5 638 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 TMEM255AQ5JRV8 349 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 FAM205BPQ63HN1 556 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 ZNF774Q6NX45 483 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 C1QL2Q7Z5L3 287 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 PEG10Q86TG7 708 aaKnown RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 BPIFB2Q8N4F0 458 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 PCYOX1LQ8NBM8 494 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 FNDC8Q8TC99 324 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 KLF14Q8TD94 323 aaPredicted RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 ST7LQ8TDW4 575 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 C10orf82Q8WW14 230 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 GEMIN6Q8WXD5 167 aaKnown RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 LZICQ8WZA0 190 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 NMD3Q96D46 503 aaKnown RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 MARS2Q96GW9 593 aaKnown RBP10.84□□□□□ -0.67
CD44-203ENST00000278386 ZNF583Q96ND8 569 aa10.84□□□□□ -0.67
CD44-203ENST00000278386 JMJD8Q96S16 334 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms