RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 DEPDC4Q8N2C3 294 aa12.48□□□□□ -0.41
SSBP1-201ENST00000265304 TCEANCQ8N8B7 351 aa12.48□□□□□ -0.41
SSBP1-201ENST00000265304 S100PBPQ96BU1 408 aa12.48□□□□□ -0.41
SSBP1-201ENST00000265304 ADI1Q9BV57 179 aa12.48□□□□□ -0.41
SSBP1-201ENST00000265304 ACTR6Q9GZN1 396 aa12.48□□□□□ -0.41
SSBP1-201ENST00000265304 SRA1Q9HD15 236 aaKnown RBP12.48□□□□□ -0.41
SSBP1-201ENST00000265304 KCNG2Q9UJ96 466 aa12.48□□□□□ -0.41
SSBP1-201ENST00000265304 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-201ENST00000265304 AMDHD2Q9Y303 409 aa12.48□□□□□ -0.41
SSBP1-201ENST00000265304 FLNBO75369 2602 aaKnown RBP12.48□□□□□ -0.41
SSBP1-201ENST00000265304 AKAP6Q13023 2319 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 CIB4A0PJX0 185 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 FAM183AA6NL82 134 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 TLX2O43763 284 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-201ENST00000265304 TFP02787 698 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 SCG5P05408 212 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 MMP7P09237 267 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-201ENST00000265304 MSR1P21757 451 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 CAPGP40121 348 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 ENDOGQ14249 297 aaKnown RBP12.47□□□□□ -0.41
SSBP1-201ENST00000265304 GGTLC2Q14390 218 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 DAZAP2Q15038 168 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-201ENST00000265304 TAB1Q15750 504 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 MEDAGQ5VYS4 303 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 PLBD1Q6P4A8 553 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 CXXC5Q7LFL8 322 aaKnown RBP12.47□□□□□ -0.41
SSBP1-201ENST00000265304 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 ZNF555Q8NEP9 628 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 UBE2FQ969M7 185 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 PLEKHA8Q96JA3 519 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 WFIKKN1Q96NZ8 548 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 TEAD3Q99594 435 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 MRPL22Q9NWU5 206 aaKnown RBP12.47□□□□□ -0.41
SSBP1-201ENST00000265304 NDRG3Q9UGV2 375 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 GMPPBQ9Y5P6 360 aa12.47□□□□□ -0.41
SSBP1-201ENST00000265304 HRNRQ86YZ3 2850 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-201ENST00000265304 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 FAM221AA4D161 298 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 CCDC182A6NF36 153 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 RAD51DO75771 328 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 GOSR1O95249 250 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 IGKV3-15P01624 115 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 IGLV1-44P01699 117 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 CLUP10909 449 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 B4GALT1P15291 398 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 CBR1P16152 277 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 CDAP32320 146 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 HSPA13P48723 471 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 AQP4P55087 323 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 TSC22D1Q15714 1073 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 HIKESHIQ53FT3 197 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 MEPCEQ7L2J0 689 aaKnown RBP12.46□□□□□ -0.41
SSBP1-201ENST00000265304 TIGD4Q8IY51 512 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 ENTHD1Q8IYW4 607 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 FAM81AQ8TBF8 368 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 FAM222BQ8WU58 562 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 NSMAFQ92636 917 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 APOL4Q9BPW4 351 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 CYB5R1Q9UHQ9 305 aa12.46□□□□□ -0.41
SSBP1-201ENST00000265304 CELSR2Q9HCU4 2923 aa12.46□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF503-AS2A6NEH8 195 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 TUBAL3A6NHL2 446 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 FARS2O95363 451 aaKnown RBP12.45□□□□□ -0.42
SSBP1-201ENST00000265304 CRYGSP22914 178 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 HTR1FP30939 366 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 FMO3P31513 532 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 PYCR1P32322 319 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 GUCA1AP43080 201 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-201ENST00000265304 C9orf135Q5VTT2 229 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 RHOUQ7L0Q8 258 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 GID4Q8IVV7 300 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 BBS1Q8NFJ9 593 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 OR9Q1Q8NGQ5 310 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 FGFBP3Q8TAT2 258 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 C11orf40Q8WZ69 217 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 FBXO17Q96EF6 278 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF582Q96NG8 517 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-201ENST00000265304 IL4I1Q96RQ9 567 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF416Q9BWM5 594 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 MED20Q9H944 212 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 MRPS18AQ9NVS2 196 aaKnown RBP12.45□□□□□ -0.42
SSBP1-201ENST00000265304 KCNN3Q9UGI6 736 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 WARS2Q9UGM6 360 aaKnown RBP12.45□□□□□ -0.42
SSBP1-201ENST00000265304 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
SSBP1-201ENST00000265304 SH3D21A4FU49 640 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 SLC22A31A6NKX4 558 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 C12orf71A8MTZ7 269 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 WBP4O75554 376 aaKnown RBP12.44□□□□□ -0.42
SSBP1-201ENST00000265304 UBL3O95164 117 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 WNT11O96014 354 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 GYPBP06028 91 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 ARR3P36575 388 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 PCBD1P61457 104 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 AQP6Q13520 282 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 MAD2L1BPQ15013 274 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-201ENST00000265304 PPA1Q15181 289 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 SNCBQ16143 134 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 UGT2A3Q6UWM9 527 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 IZUMO2Q6UXV1 221 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms