RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 ZNF770Q6IQ21 691 aaPredicted RBP13.78□□□□□ -0.2
CASC3-201ENST00000264645 FGGYQ96C11 551 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 LMF2Q9BU23 707 aaKnown RBP13.78□□□□□ -0.2
CASC3-201ENST00000264645 TMEM59Q9BXS4 323 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 KLRF1Q9NZS2 232 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 CCL26Q9Y258 94 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 LAMB2P55268 1798 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 DAOP14920 347 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 PTGFRP43088 359 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 ERV3-1Q14264 604 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 ZNF542PQ5EBM4 170 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 SLC35D3Q5M8T2 416 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 BEND4Q6ZU67 534 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 RTN4RL1Q86UN2 441 aaPredicted RBP13.78□□□□□ -0.2
CASC3-201ENST00000264645 LINC00346Q8IVM7 164 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 NICN1Q9BSH3 213 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 MED9Q9NWA0 146 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 CD37P11049 281 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 ITGB8P26012 769 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 NHLRC3Q5JS37 347 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 MORN1Q5T089 497 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 SHEQ5VZ18 495 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 MCATQ8IVS2 390 aaKnown RBP13.77□□□□□ -0.2
CASC3-201ENST00000264645 OR11G2Q8NGC1 345 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 KIRREL1Q96J84 757 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 SUCNR1Q9BXA5 334 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 C1orf123Q9NWV4 160 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 ADAMTSL1Q8N6G6 1762 aa13.77□□□□□ -0.2
CASC3-201ENST00000264645 A0A0U1RQK1 487 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 PTP4A3O75365 173 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 HLA-DQB1P01920 261 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 NAGAP17050 411 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 NFYBP25208 207 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 G0S2P27469 103 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 FCGR2CP31995 323 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 HRH1P35367 487 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.77□□□□□ -0.21
CASC3-201ENST00000264645 OR1J1Q8NGS3 322 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 CLCC1Q96S66 551 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 ADGRL4Q9HBW9 690 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 CTSFQ9UBX1 484 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 SDCBPO00560 298 aaPredicted RBP13.77□□□□□ -0.21
CASC3-201ENST00000264645 ALOX5APP20292 161 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 ZNF776Q68DI1 518 aaPredicted RBP13.77□□□□□ -0.21
CASC3-201ENST00000264645 ZNF660Q6AZW8 331 aaPredicted RBP13.77□□□□□ -0.21
CASC3-201ENST00000264645 WBP2NLQ6ICG8 309 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 TCEAL6Q6IPX3 200 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 PWWP2BQ6NUJ5 590 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 ATRAIDQ6UW56 229 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
CASC3-201ENST00000264645 FAM181AQ8N9Y4 354 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 PLPP5Q8NEB5 264 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 ASB17Q8WXJ9 295 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 TMEM234Q8WY98 164 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 SIGLEC7Q9Y286 467 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 PCDHGA5Q9Y5G8 931 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 WNK3Q9BYP7 1800 aa13.77□□□□□ -0.21
CASC3-201ENST00000264645 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 A0A1B0GTH9 108 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 JTBO76095 146 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 RPS21P63220 83 aaKnown RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 C1orf61Q13536 156 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 ZNF239Q16600 458 aaKnown RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 HNRNPA1L2Q32P51 320 aaKnown RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 ZNF695Q8IW36 515 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 OR2G2Q8NGZ5 317 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 RXFP4Q8TDU9 374 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 DCBLD2Q96PD2 775 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 UBL7Q96S82 380 aaPredicted RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 SF3B6Q9Y3B4 125 aaKnown RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 SHISA3A0PJX4 238 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 SCAF4O95104 1147 aaKnown RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 IGHA1P01876 353 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 MT-ND4LP03901 98 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 ABCD3P28288 659 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 MARCH3Q86UD3 253 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 ANGPTL5Q86XS5 388 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 UBAC2Q8NBM4 344 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 EPHX3Q9H6B9 360 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 ZNF587BE7ETH6 402 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 H3BML4 177 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 APBB3O95704 486 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 THBS1P07996 1170 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 EPHA1P21709 976 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 PPIAP62937 165 aaKnown RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 DUSP8Q13202 625 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 DCAF12L2Q5VW00 463 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 DMKNQ6E0U4 476 aaPredicted RBP13.76□□□□□ -0.21
CASC3-201ENST00000264645 ZNF709Q8N972 641 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 SPACA5Q96QH8 159 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 MMP26Q9NRE1 261 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 RAB22AQ9UL26 194 aa13.76□□□□□ -0.21
CASC3-201ENST00000264645 TRBV23-1A0A0A0MS06 115 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 CDC14CA4D256 554 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 DIRAS3O95661 229 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms