RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 MARVELD3Q96A59 401 aa16.05■□□□□ 0.16
SDF4-201ENST00000263741 NPAP1Q9NZP6 1156 aa16.05■□□□□ 0.16
SDF4-201ENST00000263741 UGT2A1Q9Y4X1 527 aa16.05■□□□□ 0.16
SDF4-201ENST00000263741 ARPC3O15145 178 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 ATE1O95260 518 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 APEHP13798 732 aaKnown RBP16.04■□□□□ 0.16
SDF4-201ENST00000263741 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.04■□□□□ 0.16
SDF4-201ENST00000263741 PPA1Q15181 289 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 PGGHGQ32M88 737 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 KDM4DQ6B0I6 523 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 OR7E24Q6IFN5 339 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 SLC25A47Q6Q0C1 308 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 C1orf162Q8NEQ5 155 aaPredicted RBP16.04■□□□□ 0.16
SDF4-201ENST00000263741 DACH2Q96NX9 599 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 TOR3AQ9H497 397 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 SLC17A5Q9NRA2 495 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 DCTN6O00399 190 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 EPXP11678 715 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 ENTPD1P49961 510 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 GINS1Q14691 196 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 TIMM23BQ5SRD1 257 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 ACSM5Q6NUN0 579 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 ANKRD16Q6P6B7 361 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 ADCK1Q86TW2 530 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 LNX2Q8N448 690 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 OSBPL10Q9BXB5 764 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 RPRD1BQ9NQG5 326 aaKnown RBP16.04■□□□□ 0.16
SDF4-201ENST00000263741 TMEM38BQ9NVV0 291 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 SLC25A15Q9Y619 301 aa16.04■□□□□ 0.16
SDF4-201ENST00000263741 RTTNQ86VV8 2226 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 A0A1W2PPL8 197 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 OR6C68A6NDL8 312 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 TRIM64BA6NI03 449 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 CENPBD1B2RD01 187 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 GPANK1O95872 356 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 PATE4P0C8F1 98 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 HOXC12P31275 282 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 CAPZA2P47755 286 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 C10orf128Q5T292 105 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 ZNF295-AS1Q8N0V1 137 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 FAM222BQ8WU58 562 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 RBP7Q96R05 134 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 NUAK2Q9H093 628 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 NOX3Q9HBY0 568 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 SNX5Q9Y5X3 404 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 PLCE1Q9P212 2302 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 ITPR2Q14571 2701 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 M0R129 80 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 SLC16A7O60669 478 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 HLA-HP01893 362 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 PRF1P14222 555 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 PPP3CBP16298 524 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 POLR2IP36954 125 aaKnown RBP16.03■□□□□ 0.16
SDF4-201ENST00000263741 ZNF83P51522 516 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 ZNF133P52736 654 aaPredicted RBP16.03■□□□□ 0.16
SDF4-201ENST00000263741 RAD23AP54725 363 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 CRMP1Q14194 572 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 ZNF829Q3KNS6 432 aaPredicted RBP16.03■□□□□ 0.16
SDF4-201ENST00000263741 ZNF362Q5T0B9 420 aaPredicted RBP16.03■□□□□ 0.16
SDF4-201ENST00000263741 THEM4Q5T1C6 240 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 SLC27A4Q6P1M0 643 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 LRRC18Q8N456 261 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 OR9Q1Q8NGQ5 310 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 OR10A4Q9H209 315 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 PALMDQ9NP74 551 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 ZNF224Q9NZL3 707 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 VSX1Q9NZR4 365 aaPredicted RBP16.03■□□□□ 0.16
SDF4-201ENST00000263741 KCNN3Q9UGI6 736 aa16.03■□□□□ 0.16
SDF4-201ENST00000263741 A0A1W2PPW3 197 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 FAM171A2A8MVW0 826 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 ZNF84P51523 738 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 CRISP1P54107 249 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 IL18R1Q13478 541 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 PARP8Q8N3A8 854 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 C17orf78Q8N4C9 275 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 SLC37A3Q8NCC5 494 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 NPEPL1Q8NDH3 523 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 FGFBP3Q8TAT2 258 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 HSD17B8Q92506 261 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 MUCL1Q96DR8 90 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 RIBC2Q9H4K1 309 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 SEC61A2Q9H9S3 476 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 FAM118AQ9NWS6 357 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 ZNF226Q9NYT6 803 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 APCP25054 2843 aa16.02■□□□□ 0.15
SDF4-201ENST00000263741 FAM183AA6NL82 134 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 DEFB108AA8MXU0 73 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 CASKO14936 926 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 CRYGSP22914 178 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 CRHBPP24387 322 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 UBE2NP61088 152 aaKnown RBP16.01■□□□□ 0.15
SDF4-201ENST00000263741 PIGFQ07326 219 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.01■□□□□ 0.15
SDF4-201ENST00000263741 SKA3Q8IX90 412 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 SLC22A24Q8N4F4 322 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 NABP1Q96AH0 204 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 HS3ST6Q96QI5 342 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 MED20Q9H944 212 aa16.01■□□□□ 0.15
SDF4-201ENST00000263741 SRA1Q9HD15 236 aaKnown RBP16.01■□□□□ 0.15
SDF4-201ENST00000263741 RHBDL2Q9NX52 303 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms