RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 RAF1P04049 648 aa16.08■□□□□ 0.17
NOTCH3-201ENST00000263388 IGFBP1P08833 259 aaPredicted RBP16.08■□□□□ 0.17
NOTCH3-201ENST00000263388 TEAD1P28347 426 aa16.08■□□□□ 0.17
NOTCH3-201ENST00000263388 B3GNT9Q6UX72 402 aa16.08■□□□□ 0.17
NOTCH3-201ENST00000263388 NAXDQ8IW45 347 aa16.08■□□□□ 0.17
NOTCH3-201ENST00000263388 ZNF845Q96IR2 970 aaPredicted RBP16.08■□□□□ 0.17
NOTCH3-201ENST00000263388 TMEM235A6NFC5 223 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 TIGD3Q6B0B8 471 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 SLC39A13Q96H72 371 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 KCNJ15Q99712 375 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 ADGRG3Q86Y34 549 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 SCPEP1Q9HB40 452 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 CALCBP10092 127 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 SCARB1Q8WTV0 552 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 PLEKHF2Q9H8W4 249 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF586Q9NXT0 402 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 CSN1S1P47710 185 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 OR6K3Q8NGY3 331 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 LYSMD1Q96S90 227 aa16.08■□□□□ 0.16
NOTCH3-201ENST00000263388 TMEM129A0AVI4 362 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 PRSS44E7EML9 344 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 WNT11O96014 354 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 ADH4P08319 380 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 PIGAP37287 484 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 MARCH8Q5T0T0 291 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 SYT13Q7L8C5 426 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 ZFPM2Q8WW38 1151 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 SLC35D1Q9NTN3 355 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 GAR1Q9NY12 217 aaKnown RBP16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 BCAT2O15382 392 aaPredicted RBP16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 CCR9P51686 369 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 LTC4SQ16873 150 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 Q6ZPB1 254 aaPredicted RBP16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 PLPP7Q8NBV4 271 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 WWTR1Q9GZV5 400 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF230Q9UIE0 474 aaPredicted RBP16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 TMED7-TICAM2A0A0A6YYA0 188 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 A0A1B0GWA3 101 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 DOC2BQ14184 412 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 BAK1Q16611 211 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 SLC48A1Q6P1K1 146 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 ASB13Q8WXK3 278 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 TM4SF18Q96CE8 201 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 TMED7Q9Y3B3 224 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 GOLT1BQ9Y3E0 138 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 S100A8P05109 93 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 CT45A10P0DMU9 189 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 GABRA4P48169 554 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 PMPCAQ10713 525 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 SEMA3BQ13214 749 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 CRMP1Q14194 572 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF836Q6ZNA1 936 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 PISDQ9UG56 409 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 H7C1C5 153 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 CHRM2P08172 466 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 LCN6P62502 163 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 EXT1Q16394 746 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 CELF2-AS1Q8N7Q2 184 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 UBQLN3Q9H347 655 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 ZBTB42B2RXF5 422 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 TAPBPO15533 448 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 IAH1Q2TAA2 248 aaPredicted RBP16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 TACR1P25103 407 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 LILRA2Q8N149 483 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 NKX6-2Q9C056 277 aaPredicted RBP16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
NOTCH3-201ENST00000263388 SPI1P17947 270 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 POU3F3P20264 500 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 DDOSTP39656 456 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 FAM185AQ8N0U4 392 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 OR5D18Q8NGL1 313 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 MRPL38Q96DV4 380 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF355PQ9NSJ1 428 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 GAB2Q9UQC2 676 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 MTHFD2P13995 350 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 ISL2Q96A47 359 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 AMBRA1Q9C0C7 1298 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 TAAR5O14804 337 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 PIPP12273 146 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 SMAD2Q15796 467 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 INSM2Q96T92 566 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 YTHDF2Q9Y5A9 579 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 TNRC6CQ9HCJ0 1690 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 NKX6-3A6NJ46 265 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 HCRTR1O43613 425 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 GLB1P16278 677 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 RGRP47804 291 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 RAB13P51153 203 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 PFN3P60673 137 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 H3F3AP84243 136 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 PHLDA2Q53GA4 152 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 TMUB2Q71RG4 321 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 SLC35G3Q8N808 338 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 EMG1Q92979 244 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 FER1L6-AS2Q96M78 137 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 HEMK1Q9Y5R4 338 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 ZFP92A6NM28 416 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 DEGS1O15121 323 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms