RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 LINC00114Q6XXX2 140 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 SLC22A18ASQ8N1D0 253 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 OR4S1Q8NGB4 309 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 TPSD1Q9BZJ3 242 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 MTFP1Q9UDX5 166 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 OPN4Q9UHM6 478 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 TMEM14AQ9Y6G1 99 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 TMEM212A6NML5 194 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 TMEM150CB9EJG8 249 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 CYB5AP00167 134 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 CSF1P09603 554 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 ALOX5APP20292 161 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.44□□□□□ -0.58
LIG1-201ENST00000263274 PRSS35Q8N3Z0 413 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 LMX1AQ8TE12 382 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 C15orf40Q8WUR7 153 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 TAS2R4Q9NYW5 299 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 TMEM184BQ9Y519 407 aaPredicted RBP11.44□□□□□ -0.58
LIG1-201ENST00000263274 SLCO1B1Q9Y6L6 691 aa11.44□□□□□ -0.58
LIG1-201ENST00000263274 LAMA1P25391 3075 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 TMEM235A6NFC5 223 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 C5orf67F2Z3F1 127 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 NMBP08949 121 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 PPP3CBP16298 524 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 EGR4Q05215 589 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 SCRN3Q0VDG4 424 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 CDNFQ49AH0 187 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 KLHL26Q53HC5 615 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 LRRTM1Q86UE6 522 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 ZNF524Q96C55 264 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 NMNAT2Q9BZQ4 307 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 SLC6A15Q9H2J7 730 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 B9D1Q9UPM9 204 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 YBX2Q9Y2T7 364 aaKnown RBP11.43□□□□□ -0.58
LIG1-201ENST00000263274 NOSIPQ9Y314 301 aaKnown RBP11.43□□□□□ -0.58
LIG1-201ENST00000263274 ETV7Q9Y603 341 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 KIR2DS5A0A0G2JLQ3 304 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 A0A0G2JNG1 304 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 C13orf42A0A1B0GVH6 325 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 KIR2DS3K7RE56 304 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 TNFRSF10CO14798 259 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 AKR1C2P52895 323 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 FBXW4P57775 412 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 AKR1C1Q04828 323 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 KIR2DS5Q14953 304 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 ACKR1Q16570 336 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 CORO6Q6QEF8 472 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 STPG2Q8N412 459 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 C12orf45Q8N5I9 185 aaPredicted RBP11.43□□□□□ -0.58
LIG1-201ENST00000263274 SPICQ8N5J4 248 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 OR51A2Q8NGJ7 313 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 STK35Q8TDR2 534 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 PLEKHA1Q9HB21 404 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 TAS2R3Q9NYW6 316 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 EMC3Q9P0I2 261 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 HIF3AQ9Y2N7 669 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 EMC9Q9Y3B6 208 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 TRANK1O15050 2925 aa11.43□□□□□ -0.58
LIG1-201ENST00000263274 TMEM82A0PJX8 343 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 EEF1E1-BLOC1S5C9J1V9 151 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 GP1BBP13224 206 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 ZNF823P16415 610 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 CD1CP29017 333 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 DLX2Q07687 328 aaPredicted RBP11.42□□□□□ -0.58
LIG1-201ENST00000263274 GFOD2Q3B7J2 385 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 MANEAQ5SRI9 462 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 GLT8D1Q68CQ7 371 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 RHOUQ7L0Q8 258 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 ATG4DQ86TL0 474 aaPredicted RBP11.42□□□□□ -0.58
LIG1-201ENST00000263274 STEAP2Q8NFT2 490 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 OR13C3Q8NGS6 347 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 GPR119Q8TDV5 335 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 ELSPBP1Q96BH3 223 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 KLHDC7BQ96G42 594 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 NKX2-4Q9H2Z4 354 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 TAS2R8Q9NYW2 309 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 MLXQ9UH92 298 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 SNRPGP15A8MWD9 76 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 ALOX12BO75342 701 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 PNPP00491 289 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 RLN2P04090 185 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 IGFBP4P22692 258 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 KIR3DL2P43630 455 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 ARRB1P49407 418 aaPredicted RBP11.42□□□□□ -0.58
LIG1-201ENST00000263274 RIDAP52758 137 aaKnown RBP11.42□□□□□ -0.58
LIG1-201ENST00000263274 RASGEF1BQ0VAM2 473 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 NHLRC3Q5JS37 347 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 SLC18B1Q6NT16 456 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 CDC20BQ86Y33 519 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 ZNF440Q8IYI8 595 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 GABRG1Q8N1C3 465 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 BPIFB2Q8N4F0 458 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 EID2Q8N6I1 236 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 C4orf45Q96LM5 186 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 GABRG3Q99928 467 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 COA3Q9Y2R0 106 aaPredicted RBP11.42□□□□□ -0.58
LIG1-201ENST00000263274 NPTNQ9Y639 398 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms