RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 RBM4BQ9BQ04 359 aaKnown RBP16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 RBM4Q9BWF3 364 aaKnown RBP16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 RACGAP1Q9H0H5 632 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 POLE4Q9NR33 117 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 OAZ3Q9UMX2 235 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 B9D1Q9UPM9 204 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 COA3Q9Y2R0 106 aaPredicted RBP16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 ATP23Q9Y6H3 246 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 ROS1P08922 2347 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 PLCE1Q9P212 2302 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 RAF1P04049 648 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 TP53P04637 393 aaPredicted RBP16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 IGFBP1P08833 259 aaPredicted RBP16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 DAPP51397 102 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 CDH11P55287 796 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 NAAAQ02083 359 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 GINS1Q14691 196 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF611Q8N823 705 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 NPEPL1Q8NDH3 523 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 KBTBD8Q8NFY9 601 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 OR10H5Q8NGA6 315 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 OR4F15Q8NGB8 312 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 NABP1Q96AH0 204 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 PKP2Q99959 881 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 CMC2Q9NRP2 79 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF224Q9NZL3 707 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 MOKQ9UQ07 419 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 TIMM10BQ9Y5J6 103 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 AKAP6Q13023 2319 aa16.31■□□□□ 0.2
CYSTM1-201ENST00000261811 SAC3D1A6NKF1 404 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 H3BNX3 289 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 PLAUP00749 431 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 HLA-DQA2P01906 255 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 SERPINA5P05154 406 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 IGFBP5P24593 272 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 BLVRAP53004 296 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 CRISP1P54107 249 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 LSM6P62312 80 aaKnown RBP16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 GALK2Q01415 458 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 SCRN3Q0VDG4 424 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 ETFDHQ16134 617 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 PAMR1Q6UXH9 720 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 ZBTB46Q86UZ6 589 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 SLC37A3Q8NCC5 494 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 PROKR2Q8NFJ6 384 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 OR4Q3Q8NH05 313 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 PIGTQ969N2 578 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 ST6GALNAC2Q9UJ37 374 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 POLR1DQ9Y2S0 133 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 SPG11Q96JI7 2443 aa16.3■□□□□ 0.2
CYSTM1-201ENST00000261811 OR6C68A6NDL8 312 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF503-AS2A6NEH8 195 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 SHISA9B4DS77 424 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 TMCC2O75069 709 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 BAG2O95816 211 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 PATE4P0C8F1 98 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF14P17017 642 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 APLNRP35414 380 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 CDK5Q00535 292 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 RAB39AQ14964 217 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 TBC1D28Q2M2D7 210 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 KDM4DQ6B0I6 523 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 UNQ6126/PRO20091Q6UXV3 157 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 OR6V1Q8N148 313 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 CYB561A3Q8NBI2 242 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 HTRA1Q92743 480 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 C9orf16Q9BUW7 83 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 CDADC1Q9BWV3 514 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 SLC25A19Q9HC21 320 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 NBPF19A0A087WUL8 3843 aa16.29■□□□□ 0.2
CYSTM1-201ENST00000261811 FBN2P35556 2912 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 A0A1W2PPR1 153 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 ERICH4A6NGS2 130 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 ATP6V1G2-DDX39BF2Z307 99 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF823P16415 610 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF32P17041 273 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 SLC25A1P53007 311 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 AQP6Q13520 282 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 KCNMB1Q16558 191 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF544Q6NX49 715 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 FBXL14Q8N1E6 418 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 PQLC1Q8N2U9 271 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 IQCF1Q8N6M8 205 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 SLC30A7Q8NEW0 376 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 OTULINQ96BN8 352 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 TSSK2Q96PF2 358 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 CCL19Q99731 98 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 DHRS9Q9BPW9 319 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF416Q9BWM5 594 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 CDH20Q9HBT6 801 aa16.28■□□□□ 0.2
CYSTM1-201ENST00000261811 NOTCH2Q04721 2471 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 IGLV1-36A0A0B4J1U3 117 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 PRR23D1E9PI22 279 aaPredicted RBP16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 CELA3BP08861 270 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 MMP7P09237 267 aaPredicted RBP16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 PRR23D2P0DMB1 279 aaPredicted RBP16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 FMO3P31513 532 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 FABP6P51161 128 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 RAD23AP54725 363 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms