RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 MARCH1Q8TCQ1 289 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 PTP4A1Q93096 173 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 IFNA17P01571 189 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 CRYBA1P05813 215 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 MECP2P51608 486 aaKnown RBP13.55□□□□□ -0.24
KCTD3-201ENST00000259154 UBXN2BQ14CS0 331 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 HIST2H3AQ71DI3 136 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 ANKRD33Q7Z3H0 272 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 SFTPA1Q8IWL2 248 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 OR4K15Q8NH41 348 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 SFXN5Q8TD22 340 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 OR52A5Q9H2C5 316 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 ISYNA1Q9NPH2 558 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 ZFP57Q9NU63 452 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 ZMAT5Q9UDW3 170 aaKnown RBP13.55□□□□□ -0.24
KCTD3-201ENST00000259154 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 SPI1P17947 270 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 SERPINA2P20848 420 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 PTBP1P26599 531 aaKnown RBP eCLIP13.55□□□□□ -0.241e-15■■■■■ 57
KCTD3-201ENST00000259154 NR0B2Q15466 257 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 ACTBL2Q562R1 376 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM217Q8N7C4 229 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 SPPL3Q8TCT6 385 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 HPSE2Q8WWQ2 592 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 MS4A6EQ96DS6 147 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 UNKLQ9H9P5 680 aaKnown RBP13.55□□□□□ -0.24
KCTD3-201ENST00000259154 CHST11Q9NPF2 352 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 TAS2R4Q9NYW5 299 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 MIOXQ9UGB7 285 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 WDFY3Q8IZQ1 3526 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 SNRNP200O75643 2136 aaKnown RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 RHPN2P1A8MT19 583 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 CTSLP07711 333 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 HOXD4P09016 255 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 EN2P19622 333 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 EPHA1P21709 976 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 NDUFS1P28331 727 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM201Q5SNT2 666 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF784Q8NCA9 323 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 OR51T1Q8NGJ9 327 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 OR6N1Q8NGY5 312 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 RGP1Q92546 391 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 FGGYQ96C11 551 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 PRRT1Q99946 306 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 MBNL1Q9NR56 388 aaKnown RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 INPP5EQ9NRR6 644 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 SIRT3Q9NTG7 399 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 KLF8O95600 359 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 TGIF1Q15583 401 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 IAH1Q2TAA2 248 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 Q6ZNB5 142 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 DIO2Q92813 273 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 TUBG2Q9NRH3 451 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 KCNG2Q9UJ96 466 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 ASXL3Q9C0F0 2248 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 K7EPK0 472 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 PET100P0DJ07 73 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 G0S2P27469 103 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 USP53Q70EK8 1073 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 FAM71E2Q8N5Q1 922 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 SUMF2Q8NBJ7 301 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 NXPE3Q969Y0 559 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF578Q96N58 590 aaPredicted RBP13.54□□□□□ -0.24
KCTD3-201ENST00000259154 OR2M4Q96R27 311 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 SLC5A7Q9GZV3 580 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 STEAP1Q9UHE8 339 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 PLXND1Q9Y4D7 1925 aa13.54□□□□□ -0.24
KCTD3-201ENST00000259154 SULT1C2O00338 296 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 LRP3O75074 770 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM225BP0DP42 221 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 Q6ZRG5 221 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 LRP11Q86VZ4 500 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 GVQW1Q8N7I0 195 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 AVL9Q8NBF6 648 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 OPN4Q9UHM6 478 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 KCNIP3Q9Y2W7 256 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 TIMM8BQ9Y5J9 83 aaPredicted RBP13.53□□□□□ -0.24
KCTD3-201ENST00000259154 SIGLEC6O43699 453 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 PRPH2P23942 346 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 MORN4Q8NDC4 146 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 SGPP1Q9BX95 441 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 LRIT1Q9P2V4 623 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 HHLA2Q9UM44 414 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 hCG_1809904A0A1W2PP81 198 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 A0A1W2PR64 198 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 A0A1W2PRV1 198 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 OR6C76A6NM76 312 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 XRCC2O43543 280 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 AKR7A3O95154 331 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 PMS2P2O95744 297 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 CXCL10P02778 98 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 RPA2P15927 270 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 ELAVL1Q15717 326 aaKnown RBP13.53□□□□□ -0.24
KCTD3-201ENST00000259154 HIST2H3PS2Q5TEC6 136 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM225Q6GV28 225 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 ACOT7LQ6ZUV0 252 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 BAP18Q8IXM2 172 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 LINC00518Q8N0U6 118 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms