RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CST11Q9H112 138 aa10.4□□□□□ -0.74
TROAP-201ENST00000257909 WDR76Q9H967 626 aa10.4□□□□□ -0.74
TROAP-201ENST00000257909 CYTL1Q9NRR1 136 aa10.4□□□□□ -0.74
TROAP-201ENST00000257909 WIF1Q9Y5W5 379 aa10.4□□□□□ -0.74
TROAP-201ENST00000257909 SLC22A7Q9Y694 548 aa10.4□□□□□ -0.74
TROAP-201ENST00000257909 NOTCH4Q99466 2003 aa10.4□□□□□ -0.74
TROAP-201ENST00000257909 A0A0B4J2A0 478 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 CPED1A4D0V7 1026 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 EEF1E1-BLOC1S5C9J1V9 151 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 RNASEK-C17orf49H0YIS7 233 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 NKX2-2O95096 273 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 DUS4LO95620 317 aaKnown RBP10.4□□□□□ -0.75
TROAP-201ENST00000257909 IFI6P09912 130 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 FBXO45P0C2W1 286 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 ZNF28P17035 718 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 AGAP20933 346 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 AVPR2P30518 371 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 CX3CR1P49238 355 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 ARRB1P49407 418 aaPredicted RBP10.4□□□□□ -0.75
TROAP-201ENST00000257909 ID2Q02363 134 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 RUNX2Q13950 521 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 RNASE10Q5GAN6 216 aaKnown RBP10.4□□□□□ -0.75
TROAP-201ENST00000257909 FCRL6Q6DN72 434 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 OR10K2Q6IF99 312 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 CPNE2Q96FN4 548 aaPredicted RBP10.4□□□□□ -0.75
TROAP-201ENST00000257909 SMIM8Q96KF7 97 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 C4orf45Q96LM5 186 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 ZNF285Q96NJ3 590 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 TSSK2Q96PF2 358 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 LMF1Q96S06 567 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 SLC17A9Q9BYT1 436 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 ULBP3Q9BZM4 244 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 HRH4Q9H3N8 390 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 WBP1LQ9NX94 342 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 ASH2LQ9UBL3 628 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 SHPKQ9UHJ6 478 aa10.4□□□□□ -0.75
TROAP-201ENST00000257909 C5orf51A6NDU8 294 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 URADA6NGE7 173 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 CCL16O15467 120 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 LILRB3O75022 631 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 MT-ND4LP03901 98 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 GUSBP08236 651 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 LIPCP11150 499 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 RCC1P18754 421 aaPredicted RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 ALOX5APP20292 161 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 ZNF10P21506 573 aaPredicted RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 HTR2CP28335 458 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 PMELP40967 661 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 SLC6A9P48067 706 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 PPT1P50897 306 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 SNRPNP63162 240 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 FABP9Q0Z7S8 132 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 KCNAB1Q14722 419 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 EXOSC7Q15024 291 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 NKPD1Q17RQ9 610 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 ODF4Q2M2E3 257 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 PRICKLE4Q2TBC4 344 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 GXYLT1Q4G148 440 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 DEFB134Q4QY38 66 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 FAM76BQ5HYJ3 339 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 PHF19Q5T6S3 580 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 FDX2Q6P4F2 183 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 RHOUQ7L0Q8 258 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 OR6N2Q8NGY6 317 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 HIST1H2BAQ96A08 127 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 RAB7BQ96AH8 199 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 TMEM41AQ96HV5 264 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 MICU1Q9BPX6 476 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 TIMM29Q9BSF4 260 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 FAM96BQ9Y3D0 163 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 H3BSH0 61 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 MFNGO00587 321 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 TO15178 435 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 FBP1P09467 338 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 SMIM10L1P0DMW3 83 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 PRF1P14222 555 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 GRK6P43250 576 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 KIR3DL2P43630 455 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 EIF5AP63241 154 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 DMWDQ09019 674 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 PMPCAQ10713 525 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 RBM39Q14498 530 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 HMGN3Q15651 99 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 WDR38Q5JTN6 314 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 TMEM244Q5VVB8 128 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 EIF5AL1Q6IS14 154 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 KCTD9Q7L273 389 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 RCBTB1Q8NDN9 531 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 OR4E2Q8NGC2 313 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 ADAMTS17Q8TE56 1095 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 TCTEX1D2Q8WW35 142 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 SMIM10Q96HG1 83 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 ZC3H10Q96K80 434 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 RBM14Q96PK6 669 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 HCFC1R1Q9NWW0 138 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 CKLFQ9UBR5 152 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 KLK13Q9UKR3 277 aa10.39□□□□□ -0.75
TROAP-201ENST00000257909 ZNF346Q9UL40 294 aaKnown RBP10.39□□□□□ -0.75
TROAP-201ENST00000257909 KCNK6Q9Y257 313 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms